Sequence 1: | NP_001261924.1 | Gene: | Zn72D / 39764 | FlyBaseID: | FBgn0263603 | Length: | 884 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445888.1 | Gene: | Stau1 / 84496 | RGDID: | 621778 | Length: | 495 | Species: | Rattus norvegicus |
Alignment Length: | 317 | Identity: | 58/317 - (18%) |
---|---|---|---|
Similarity: | 100/317 - (31%) | Gaps: | 98/317 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 GAGGYGGYGDYRSAMQYDATKTFYQQSPASYNASGSTASVSKTHYSAP-PVKNQVKGKMDKSNGG 127
Fly 128 PKPPSSAPPAGNNYSGYDTAL-----YNAASMYVAQ--QHQGNPNQK-------------PNGGA 172
Fly 173 NNWYQRKMGA--------TIPGATAIRGMRPKAPPRPQQLHYCEVCKISCAGPQTYREHLEG--- 226
Fly 227 -------QKHKKREASLKMSASANSATQNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLH 284
Fly 285 QKLGKPIPSEEP-------------KKMG---KINFVPAAAGGAGVAKTEGGANESD 325 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Zn72D | NP_001261924.1 | ZnF_U1 | 205..236 | CDD:197732 | 8/40 (20%) |
C2H2 Zn finger | 207..229 | CDD:275371 | 6/31 (19%) | ||
ZnF_U1 | 252..284 | CDD:197732 | 4/31 (13%) | ||
C2H2 Zn finger | 255..277 | CDD:275371 | 3/21 (14%) | ||
ZnF_U1 | 368..396 | CDD:197732 | |||
C2H2 Zn finger | 368..390 | CDD:275371 | |||
DZF | 577..829 | CDD:128842 | |||
Stau1 | NP_445888.1 | DSRM_SF | 1..70 | CDD:412133 | 8/40 (20%) |
DSRM_SF | 95..167 | CDD:412133 | 13/79 (16%) | ||
DSRM_STAU1_rpt4 | 194..279 | CDD:380714 | 15/87 (17%) | ||
Staufen_C | 366..475 | CDD:374568 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352094 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |