DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zn72D and tarbp2

DIOPT Version :10

Sequence 1:NP_788510.1 Gene:Zn72D / 39764 FlyBaseID:FBgn0263603 Length:884 Species:Drosophila melanogaster
Sequence 2:NP_956291.1 Gene:tarbp2 / 336141 ZFINID:ZDB-GENE-030131-8085 Length:346 Species:Danio rerio


Alignment Length:280 Identity:55/280 - (19%)
Similarity:82/280 - (29%) Gaps:107/280 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NGGANNWYQ--RKMGATIPGATAIR---------GMRP-----KAPPRPQQLHY---CEVCKISC 214
            ||..|:.|.  .:|.|..||.|.|.         |..|     ||..:..|.::   ..|..|:|
Zfish     9 NGKRNSGYTSIEQMLAVNPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVSVGDINC 73

  Fly   215 AGPQTYREHLEGQKHKKREASLKM-----------------------------------SASANS 244
            .|   :....:..|||..||:|||                                   |:|...
Zfish    74 TG---HGPSKKAAKHKAAEAALKMLKGGMLGGIGGNGMEGDGFVGIEMEGECPQSEMKSSSSTQQ 135

  Fly   245 A------------------------TQNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQ 285
            |                        ||..|..:..|. .:||             :.::.|::..
Zfish   136 AECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEF-TMTC-------------RVERFVEIGS 186

  Fly   286 KLGKPIPSEE--PKKMGKINFVPAAAGGAGVAKTEGGANESDAAGDLDDNLDDSLGENTDNIKPV 348
            ...|.:....  .|.:.:|:.||.....:..|:.|.........|.|:......||...|:::..
Zfish   187 GTSKKLAKRNAAAKMLSRIHDVPVDMRSSHEAEAEDDTFNMQIGGRLEGGKSKGLGCTWDSLRNS 251

  Fly   349 GGEYIEEVKDEEGKILSFNC 368
            .||          |||...|
Zfish   252 AGE----------KILQLRC 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zn72DNP_788510.1 ZnF_U1 205..236 CDD:197732 9/33 (27%)
C2H2 Zn finger 207..229 CDD:275371 4/21 (19%)
ZnF_U1 252..284 CDD:197732 4/31 (13%)
C2H2 Zn finger 255..277 CDD:275371 3/21 (14%)
ZnF_U1 368..396 CDD:197732 1/1 (100%)
C2H2 Zn finger 368..390 CDD:275371 1/1 (100%)
DZF 577..829 CDD:128842
tarbp2NP_956291.1 DSRM_SF 27..96 CDD:444671 21/71 (30%)
DSRM_TARBP2_rpt2 139..205 CDD:380681 9/79 (11%)
DSRM_TARBP2_rpt3 272..343 CDD:380722
Blue background indicates that the domain is not in the aligned region.

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