DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zn72D and ilf3a

DIOPT Version :9

Sequence 1:NP_001261924.1 Gene:Zn72D / 39764 FlyBaseID:FBgn0263603 Length:884 Species:Drosophila melanogaster
Sequence 2:NP_001025236.1 Gene:ilf3a / 324431 ZFINID:ZDB-GENE-030131-3151 Length:820 Species:Danio rerio


Alignment Length:500 Identity:176/500 - (35%)
Similarity:256/500 - (51%) Gaps:110/500 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 YW-----EEQRNRQYNEE-YDYNNWMSRSFGGAQRFGRMGNGPPPHFGMMPGGNVRRPESTDDRH 496
            ||     .|:..||||:. .:|..|...:....:....|  .|||          :|....:||:
Zfish    58 YWYDCLCYEEDLRQYNDYIVEYRKWEEENLHPEEPMPPM--RPPP----------QRTFVNEDRY 110

  Fly   497 AIARHAEIYPKEEELQTIQRIVSHTERALKLVSDALAEQPSDAGAANKKDKAEKPSEKDGRDNQI 561
            ..|:|..:||..|:|..:|.:|||.|.|:|.|||...|:  :||..:.|.|:.:..         
Zfish   111 LRAKHTTVYPSSEQLDAVQNMVSHIEFAMKAVSDWFNEK--EAGDTDTKSKSSQSK--------- 164

  Fly   562 FSFQKDADNGGNVVRILKGVMRVGYLAKGLLLHGDNAVELVVLCAEKPTSGLLQRVANVLPDKLK 626
                            |:||:|||.:||||||..|..:|||:|..:.|||.||:.|:..|.:.:|
Zfish   165 ----------------LRGVLRVGLVAKGLLLKDDLDLELVLLTRDAPTSSLLRLVSGKLSELIK 213

  Fly   627 EVAGDTQVNYRVEVNAEEAALIVL---DESVSVKITLTSPLLRDANPGEAATTDEGEGDSEFLP- 687
            :|   |:..|.:..:.:||::||.   :..:.::|.||||::|:....||:    ||..:|..| 
Zfish   214 DV---TEEKYVITPSIQEASVIVTSTKEPLLKLRIHLTSPVVREQVEKEAS----GEPCAESSPQ 271

  Fly   688 ----REPCLRALADLRHAKWFQARATGLQSCVMVIRILRDLCQRVSSWQSLPQWSLELLVEKVIS 748
                |:.||.:||.||.||.|||:.:||:|||:|||||||||.|||:|..|..|:||||.:|.||
Zfish   272 DALDRQKCLASLASLRQAKRFQAKVSGLESCVIVIRILRDLCSRVSTWAPLKGWTLELLCQKAIS 336

  Fly   749 SAGFPISPGDCMRRIMEALSSGFLI-NGPGLLDPCEKDPTDALLELTKQEREDLTVSAQLFLRYI 812
            ::...:.||:..||::|.|:||.:: .|||:.||||:|.|||.:.||.|:|||:|.|||..||..
Zfish   337 TSERMLGPGEAFRRVLECLASGIIMEGGPGISDPCERDTTDAAVYLTSQQREDITQSAQFALRLS 401

  Fly   813 AFRQIYKVLGMEPLPA------------------------------MKFPMRPWR---------V 838
            ||.|:||||||:.|.:                              :|||.:..|         :
Zfish   402 AFGQLYKVLGMDRLTSKAARMIEHRVPDPPIKRPRESFDGGDFDTRLKFPRKEERKEPPNALMKL 466

  Fly   839 NRKRRRSSGKAGGAPGTETESN-----DID-----ETGSDEKVAK 873
            |:.|..:..|.....|.|.|..     ::|     .||..::.||
Zfish   467 NQLRPGTVYKLASQTGPEHEPQFSMTVEVDGVTYEATGPSKRSAK 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zn72DNP_001261924.1 ZnF_U1 205..236 CDD:197732
C2H2 Zn finger 207..229 CDD:275371
ZnF_U1 252..284 CDD:197732
C2H2 Zn finger 255..277 CDD:275371
ZnF_U1 368..396 CDD:197732
C2H2 Zn finger 368..390 CDD:275371
DZF 577..829 CDD:128842 124/290 (43%)
ilf3aNP_001025236.1 DZF 165..418 CDD:295427 124/259 (48%)
DSRM 459..523 CDD:214634 10/52 (19%)
DSRM 572..>622 CDD:214634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594007
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276114at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45762
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.