DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS9 and YSH1

DIOPT Version :9

Sequence 1:NP_648838.3 Gene:IntS9 / 39763 FlyBaseID:FBgn0036570 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_013379.1 Gene:YSH1 / 850983 SGDID:S000004267 Length:779 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:148/738 - (20%)
Similarity:281/738 - (38%) Gaps:217/738 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGDLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLPFVQSLKWSNLPNFVPSRDHDPQMDGELKD 71
            |.::.:.|:|:.:||..:|||.|:.          |..|.|  ::||                  
Yeast    17 SNEVGRSCHILQYKGKTVMLDAGIH----------PAYQGL--ASLP------------------ 51

  Fly    72 CCGRVFVDSTPEFNLPMDKMLDFSEVDVILISNYL--NMLALPYITENTGFKGKVYATEPTLQIG 134
                 |.|   ||        |.|:||::|||::.  :..:|||:.:.|.|:|:|:.|.||..|.
Yeast    52 -----FYD---EF--------DLSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIY 100

  Fly   135 RFFLEELVDYIEVSPKACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYD 199
            |:.|.:.|....:..                   |.:....|...:||.:|:..|..|:..:.|.
Yeast   101 RWLLRDFVRVTSIGS-------------------SSSSMGTKDEGLFSDEDLVDSFDKIETVDYH 146

  Fly   200 EKLDILGAFIATPVSSGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALK--HADVLIM 262
            ..:|:.|... |...:|:.||::.:.:..|..::.:....|...  .|.:|.:.:.  .::|||:
Yeast   147 STVDVNGIKF-TAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREV--DRHLNSAEVPPLSSNVLIV 208

  Fly   263 TG----LTQAPTVNPDTKLGELCMNVALTIRNNGSALIPCYPSG----VVYDLFECLTQNLENAG 319
            ..    .|..|.:|.:.||.:|   :..|:...|..|:|.:..|    ::..|.|..:|:.:..|
Yeast   209 ESTFGTATHEPRLNRERKLTQL---IHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELG 270

  Fly   320 LNNVPMFFISPVADSSLA----YSNILAEWLSSA---KQNKVYLPDDPFPHAFYLRNNKLKHYNH 377
            ...||:|:.|.:|...::    |.|::.:.:...   .|...::    |.:..||||        
Yeast   271 GGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFI----FKNISYLRN-------- 323

  Fly   378 VFSEGFSKDFRQ--PCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFT--------------EPD 426
                  .:||:.  |.|:......|:.|.:...:|.|.....|.::.|              |||
Yeast   324 ------LEDFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMAKFIMLEPD 382

  Fly   427 -FPYL---QVLAPFQPLAMKAFYCPID-----TSLNYQQANKLIKELK-PNVLVI-----PEAYT 476
             .|.:   ::..|.:        |.::     ..:::|:..:.|:::. ||::::     |....
Yeast   383 TIPSINNPEITIPRR--------CQVEEISFAAHVDFQENLEFIEKISAPNIILVHGEANPMGRL 439

  Fly   477 KPHPSAPNLFIEQPDKKIITFKCGEIIRLPLK-----------------RKLDRIYITSELAQKI 524
            |....:....::..|.::..|.....:.:.|:                 .|.:.:.|..|:|.||
Yeast   440 KSALLSNFASLKGTDNEVHVFNPRNCVEVDLEFQGVKVAKAVGNIVNEIYKEENVEIKEEIAAKI 504

  Fly   525 SP----------KEVAAGVTFS------TLTGVLQVKDKVHCIQPCADSVKDE---TISSNSAPT 570
            .|          .:...|:...      .::|:|...||...:...:.|...|   .:|:.....
Yeast   505 EPIKEENEDNLDSQAEKGLVDEEEHKDIVVSGILVSDDKNFELDFLSLSDLREHHPDLSTTILRE 569

  Fly   571 KEDVLKNVKYE---------YGSIDV----DAV------MKKLAQDGFSNIKLDRTG-------G 609
            ::.|..|.|.|         :|..:|    |.|      :|:.::|..:|     ||       |
Yeast   570 RQSVRVNCKKELIYWHILQMFGEAEVLQDDDRVTNQEPKVKEESKDNLTN-----TGKLILQIMG 629

  Fly   610 ALTLNLVNEDTVIKFED---NET 629
            .:.|.:||...|:::..   |:|
Yeast   630 DIKLTIVNTLAVVEWTQDLMNDT 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS9NP_648838.3 metallo-hydrolase-like_MBL-fold 1..264 CDD:304873 60/260 (23%)
Beta-Casp 304..428 CDD:214983 30/147 (20%)
YSH1NP_013379.1 YSH1 9..470 CDD:224157 112/549 (20%)
CPSF73-100_C 533..777 CDD:403042 27/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1236
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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