DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS9 and YSH1

DIOPT Version :10

Sequence 1:NP_648838.3 Gene:IntS9 / 39763 FlyBaseID:FBgn0036570 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_013379.1 Gene:YSH1 / 850983 SGDID:S000004267 Length:779 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:148/738 - (20%)
Similarity:281/738 - (38%) Gaps:217/738 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGDLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLPFVQSLKWSNLPNFVPSRDHDPQMDGELKD 71
            |.::.:.|:|:.:||..:|||.|:.          |..|.|  ::||                  
Yeast    17 SNEVGRSCHILQYKGKTVMLDAGIH----------PAYQGL--ASLP------------------ 51

  Fly    72 CCGRVFVDSTPEFNLPMDKMLDFSEVDVILISNYL--NMLALPYITENTGFKGKVYATEPTLQIG 134
                 |.|   ||        |.|:||::|||::.  :..:|||:.:.|.|:|:|:.|.||..|.
Yeast    52 -----FYD---EF--------DLSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIY 100

  Fly   135 RFFLEELVDYIEVSPKACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYD 199
            |:.|.:.|....:..                   |.:....|...:||.:|:..|..|:..:.|.
Yeast   101 RWLLRDFVRVTSIGS-------------------SSSSMGTKDEGLFSDEDLVDSFDKIETVDYH 146

  Fly   200 EKLDILGAFIATPVSSGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALK--HADVLIM 262
            ..:|:.|... |...:|:.||::.:.:..|..::.:....|...  .|.:|.:.:.  .::|||:
Yeast   147 STVDVNGIKF-TAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREV--DRHLNSAEVPPLSSNVLIV 208

  Fly   263 TG----LTQAPTVNPDTKLGELCMNVALTIRNNGSALIPCYPSG----VVYDLFECLTQNLENAG 319
            ..    .|..|.:|.:.||.:|   :..|:...|..|:|.:..|    ::..|.|..:|:.:..|
Yeast   209 ESTFGTATHEPRLNRERKLTQL---IHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELG 270

  Fly   320 LNNVPMFFISPVADSSLA----YSNILAEWLSSA---KQNKVYLPDDPFPHAFYLRNNKLKHYNH 377
            ...||:|:.|.:|...::    |.|::.:.:...   .|...::    |.:..||||        
Yeast   271 GGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFI----FKNISYLRN-------- 323

  Fly   378 VFSEGFSKDFRQ--PCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFT--------------EPD 426
                  .:||:.  |.|:......|:.|.:...:|.|.....|.::.|              |||
Yeast   324 ------LEDFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMAKFIMLEPD 382

  Fly   427 -FPYL---QVLAPFQPLAMKAFYCPID-----TSLNYQQANKLIKELK-PNVLVI-----PEAYT 476
             .|.:   ::..|.:        |.::     ..:::|:..:.|:::. ||::::     |....
Yeast   383 TIPSINNPEITIPRR--------CQVEEISFAAHVDFQENLEFIEKISAPNIILVHGEANPMGRL 439

  Fly   477 KPHPSAPNLFIEQPDKKIITFKCGEIIRLPLK-----------------RKLDRIYITSELAQKI 524
            |....:....::..|.::..|.....:.:.|:                 .|.:.:.|..|:|.||
Yeast   440 KSALLSNFASLKGTDNEVHVFNPRNCVEVDLEFQGVKVAKAVGNIVNEIYKEENVEIKEEIAAKI 504

  Fly   525 SP----------KEVAAGVTFS------TLTGVLQVKDKVHCIQPCADSVKDE---TISSNSAPT 570
            .|          .:...|:...      .::|:|...||...:...:.|...|   .:|:.....
Yeast   505 EPIKEENEDNLDSQAEKGLVDEEEHKDIVVSGILVSDDKNFELDFLSLSDLREHHPDLSTTILRE 569

  Fly   571 KEDVLKNVKYE---------YGSIDV----DAV------MKKLAQDGFSNIKLDRTG-------G 609
            ::.|..|.|.|         :|..:|    |.|      :|:.::|..:|     ||       |
Yeast   570 RQSVRVNCKKELIYWHILQMFGEAEVLQDDDRVTNQEPKVKEESKDNLTN-----TGKLILQIMG 629

  Fly   610 ALTLNLVNEDTVIKFED---NET 629
            .:.|.:||...|:::..   |:|
Yeast   630 DIKLTIVNTLAVVEWTQDLMNDT 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS9NP_648838.3 metallo-hydrolase-like_MBL-fold 1..264 CDD:451500 60/260 (23%)
Beta-Casp 304..428 CDD:214983 30/147 (20%)
YSH1NP_013379.1 CPSF3-like_MBL-fold 9..210 CDD:293850 60/260 (23%)
YSH1 14..432 CDD:440849 108/511 (21%)
CPSF73-100_C 533..777 CDD:463330 27/125 (22%)

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