DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS9 and dclre1c

DIOPT Version :9

Sequence 1:NP_648838.3 Gene:IntS9 / 39763 FlyBaseID:FBgn0036570 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_021330734.1 Gene:dclre1c / 566285 ZFINID:ZDB-GENE-041210-72 Length:680 Species:Danio rerio


Alignment Length:624 Identity:104/624 - (16%)
Similarity:178/624 - (28%) Gaps:260/624 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 WKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYDEKLDILGAFIATPVSSGYCLGS 221
            |::  |::|..|                |...|:|.:     ||........:.|.:|:|:|.||
Zfish   119 WED--HIVPLEL----------------DSPTSISLI-----DESTGETEDVVVTLLSAGHCPGS 160

  Fly   222 SNWVLSTAHEKICYV-----------------SGS----------STLTTHPR----PINQSALK 255
            ..::...|...:.|.                 ||.          .|....|:    |..::.|.
Zfish   161 VMFLFEGAKGTVLYTGDFRLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSREACLA 225

  Fly   256 HADVLIMTGLTQAP----TVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVYDLFECLTQNLE 316
            ....|:...:.|:|    .:|.....|                             :|.|..||.
Zfish   226 GIQQLVQDWICQSPYHVVWLNCKAAYG-----------------------------YEYLFTNLG 261

  Fly   317 NAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAFYLRNNKLKHYNHVFSE 381
            ..        |.|.:..:||.....:.|.|.....|               |..::....|...|
Zfish   262 QE--------FNSQIHVNSLDMFKKMPEILCHVTTN---------------RATQIHACRHPKDE 303

  Fly   382 GFSKDFRQPC-----------VVFCGHPSLRFGDAVH----FIEMWGNNPNNSIIFTEPDFPYLQ 431
            .|.:..|.||           ::.....::.||:...    .::|..::......|..   .||:
Zfish   304 EFFRANRLPCGSTAPDGIPLNIISIKPSTIWFGERTRKTSVVVKMGSSSYRACFSFHS---SYLE 365

  Fly   432 VLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNLFIEQPDKKIIT 496
            |      ....::.||::...|.....|.:::|...:                       |.:..
Zfish   366 V------KDFLSYICPVNIYPNVIPLGKTVEDLTELL-----------------------KPLCR 401

  Fly   497 FKCG--EIIRLP---LKRKLDRIYITSE-------LAQKISPKEVAAGVTFSTLTGV-LQVK--- 545
            ..||  ||:..|   |||...|  .|||       |.:::|.......:|.|.||.| ::|:   
Zfish   402 KHCGREEIVYKPLGALKRTRKR--STSEGSDSDGDLFEEVSTAPRRRKITVSDLTTVAIRVRPHS 464

  Fly   546 --------DKVHCI-------------------------------------------QPCADSV- 558
                    |:.:.:                                           :||:... 
Zfish   465 ANADSHDNDQTYSLIKLCPSAHTSNYMDCTESNDDDDDEDDAAEQTPAAAPPPSSTEKPCSKHTH 529

  Fly   559 KDETISSNSAPTKEDVLKNVKYEYGSIDVDAVMKKLAQDGFSNIKLDRTGGALTLNLVN------ 617
            .|.:::|::.|..|...|          .:.|:.       ...:|:.:....||:..|      
Zfish   530 SDSSLTSSTQPCWEKFFK----------AEVVLT-------DESELENSQNTQTLSTENTASQSP 577

  Fly   618 -------EDTVIKFEDNE-THIICGGKPTTRLKLRDTIM 648
                   ||:.:....:: |||...|  |..|...||||
Zfish   578 ELFQDEDEDSSVHMSSSQSTHISDAG--TESLSQVDTIM 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS9NP_648838.3 metallo-hydrolase-like_MBL-fold 1..264 CDD:304873 24/137 (18%)
Beta-Casp 304..428 CDD:214983 22/138 (16%)
dclre1cXP_021330734.1 artemis-SNM1C-like_MBL-fold 1..212 CDD:293855 20/115 (17%)
DRMBL 280..384 CDD:311461 20/127 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1236
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.