DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS9 and Cpsf73

DIOPT Version :9

Sequence 1:NP_648838.3 Gene:IntS9 / 39763 FlyBaseID:FBgn0036570 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster


Alignment Length:697 Identity:143/697 - (20%)
Similarity:257/697 - (36%) Gaps:221/697 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLPFVQSLKWSNLPNFVPSRDHDPQMDGELKDCC 73
            ::.:.|.::.|||.:||||||:                               .|.:.|      
  Fly    28 EVGRSCIMLEFKGKKIMLDCGI-------------------------------HPGLSG------ 55

  Fly    74 GRVFVDSTPEFNLPMDKMLDFSEVDVILISNYL--NMLALPYITENTGFKGKVYATEPTLQIGRF 136
                :|:     ||...:::..|:|::.||::.  :..|||:....|.|||:.:.|..|..|.|:
  Fly    56 ----MDA-----LPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRW 111

  Fly   137 FLEELVDYIEVSPKACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYDEK 201
            .|.   |||::|..:....|:.|                        .|::.|:.|:..:.:.|:
  Fly   112 MLS---DYIKISNISTEQMLYTE------------------------ADLEASMEKIETINFHEE 149

  Fly   202 LDILG----AFIATPVSSGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIM 262
            .|::|    |:||     |:.||::.:::..|..||.|....|              :..|..:|
  Fly   150 RDVMGVRFCAYIA-----GHVLGAAMFMIEIAGIKILYTGDFS--------------RQEDRHLM 195

  Fly   263 TGLTQAPTVNPDTKLGELCMN-----------------VALTIRNNGSALIPCYPSGVVYDLFEC 310
            .  .:.|.:.||..:.|....                 |...::..|..|||.:..|...:|...
  Fly   196 A--AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLI 258

  Fly   311 LTQN-LENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAFYLRNNKLKH 374
            |.:. .:|..|:.:|:::.|.:|...:|........::...:.::.: ::||   .:...:.||.
  Fly   259 LDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDRIRRQIAV-NNPF---VFRHISNLKG 319

  Fly   375 YNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSII--------------FTEP 425
            .:|....|       |||:......::.|.:....|.|..:|.|.:|              .:||
  Fly   320 IDHFEDIG-------PCVIMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEP 377

  Fly   426 DFPYLQVLAPFQ-PLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNLFIEQ 489
            :  .:..|:..: ||.|...|.......:|||.::.|:.|||..:|:...             ||
  Fly   378 E--EITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPTHVVLVHG-------------EQ 427

  Fly   490 PDKKIITFKCGEIIRLPLKRKLDR------------------IYITSELAQKI----SPKEVAAG 532
            .:.        ..::|.|:|:.:.                  :|...|...|:    :.|....|
  Fly   428 NEM--------SRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGSLAAKNSEVG 484

  Fly   533 VTFSTLTGVLQVKD-KVHCIQPCADSVK--DETIS----------SNSAPTKEDVLKNVKYEYGS 584
               |.|:|||..:| |.|.:.| :|..|  |.::|          .:|..|.|.:|..:  ..|.
  Fly   485 ---SKLSGVLVKRDFKYHLLAP-SDLGKYTDMSMSVVTQRQSIPWGSSLSTLELLLDRI--GAGC 543

  Fly   585 IDVDAVMKKLAQDGFSNIKLDRTGGALTLNLVNEDTVIKFEDNETHI 631
            ::|....:||           |..|.:.|.:  |..:|..|...||:
  Fly   544 VEVLEAERKL-----------RVFGCIELTV--EQKIIVMEWQATHV 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS9NP_648838.3 metallo-hydrolase-like_MBL-fold 1..264 CDD:304873 56/260 (22%)
Beta-Casp 304..428 CDD:214983 25/138 (18%)
Cpsf73NP_650738.1 YSH1 18..456 CDD:224157 109/555 (20%)
CPSF3-like_MBL-fold 18..211 CDD:293850 59/276 (21%)
Beta-Casp 252..373 CDD:214983 23/131 (18%)
RMMBL 386..426 CDD:284853 12/52 (23%)
CPSF73-100_C 483..683 CDD:215023 30/114 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440176
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1236
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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