DRSC/TRiP Functional Genomics Resources

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Protein Alignment IleRS-m and ISM1

DIOPT Version :9

Sequence 1:NP_648837.2 Gene:IleRS-m / 39762 FlyBaseID:FBgn0036569 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_015285.1 Gene:ISM1 / 856067 SGDID:S000005961 Length:1002 Species:Saccharomyces cerevisiae


Alignment Length:1031 Identity:353/1031 - (34%)
Similarity:543/1031 - (52%) Gaps:143/1031 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FRVGNRLYSMKAAKKDAKKYTDTINLPKTKFPNR--LTAAKRE---EQERLVLENKIAVSYA--- 63
            |.:.::.|..|.|      |..|:||||||||||  |....||   :..:||.:.::...:.   
Yeast    12 FSIISKRYLAKHA------YQKTLNLPKTKFPNRSNLEITLRELIPKSSQLVYKEQLRDFFEEFS 70

  Fly    64 ---YQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQRVNYIPGWDCHG 125
               ..:::|....:..|:||||||||||:||:|||:|||||||..|.:::.|:.:.|.|||||||
Yeast    71 KLNTTDEKLEFIKEKLFILHDGPPYANGELHLGHALNKILKDIINRYQLSQGKYIFYKPGWDCHG 135

  Fly   126 LPIELKATSTAPGQ-----SAQEIRQKSRAFAWEAIKSQKEEFSSWGILANWQKDNIYMTFQPEF 185
            ||||:||......|     |..:||..:...|.:|||.|:|.|..:.||.:|:..  |:|...::
Yeast   136 LPIEIKALKDLSAQQIESISPLKIRSMALKHAQKAIKRQRETFQHFAILTDWETP--YLTMDKDY 198

  Fly   186 IVNQLEMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYVRFAL-NPSSFDVK 249
            .:|||.:|..:||:||:.|..|||||...:||||||.||||:.||.|.:.||:|.| ..|..|:.
Yeast   199 EINQLNIFKEMYERGLIKRQNKPVYWGTETRTALAEGELEYNENHKSIAAYVKFPLEKKSQMDLC 263

  Fly   250 DK-------QIYALVWTTTPWTLPSNQAICYNASLEYVIVRLSDRNQDELYLMASALMADFEANT 307
            .|       .||.|:||:|||||.||:|||:|....|.::||:    .||.|:.:..:......|
Yeast   264 KKLGITNNLPIYCLIWTSTPWTLLSNRAICFNQDFSYSLLRLN----SELILVETGSIDKLGLTT 324

  Fly   308 QLKCEIVQHLSGELLSKLSYNHPIDKEQSNLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLTQ 372
            . ..|.::...|..|:.|.|.:.:..::...|....:||....|||||||||.||.:|:|:.:..
Yeast   325 N-SFETIKQFQGTHLNGLYYQNLLVDDKVGRPLLHGAHVTSGTGTGLVHTAPGHGQDDYLIGIQN 388

  Fly   373 KIPVKCFVNEEGTY------------TKEAPDFLRGKSVLD-QGNSLVLDRIAE-DVVHSS-KLE 422
            .:.:...|:.:|.|            .::..|..:|:.||| :...::|.:::: ::::.| :..
Yeast   389 GLEIYSPVDHQGRYQLNELPQSVRSIVRDEGDLTKGRQVLDAETAKIILCKLSDLNLLYKSHEYT 453

  Fly   423 HSYPIDWRTKKPVIIRASEQWFINTEKLKTPAADALEQVEIYPRANAEASKKALLTQLQKRPYWC 487
            ||||.|||:||||||||:.|||.:...:|..|.:::.:|:..|:    .....|.:.::.|..||
Yeast   454 HSYPYDWRSKKPVIIRATPQWFADLHDVKNLALESISRVKFCPK----RGYSRLSSFMKSRNEWC 514

  Fly   488 ISRQRAWGVPIPVLYSR-ESGKVVLNSALIEHLCNLLRKEGSIDFWW---VKSVEELVPEHLLRE 548
            |||||:||:||...|.: |...|::||.::.|....::::| |:.|:   ...::|.:||    :
Yeast   515 ISRQRSWGIPILSFYKKSEPDSVLMNSEILAHAIEKIKQKG-INAWFNDKDNDMKEWLPE----K 574

  Fly   549 LHHEAKDLVKGTDILDIWFDSGSTWSAVLGKD------KIADL-------YLEGYDQFTGWFQSS 600
            .|..|.:..:..|.:|:||||||:||.:  ||      |::.|       .|||.||..||||||
Yeast   575 YHDVAHEYCRSQDTMDVWFDSGSSWSVI--KDFYEKSLKLSKLPSPLYQVCLEGSDQHRGWFQSS 637

  Fly   601 LLMSIAARE--CAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITK--------KYGTDALRWW 655
            ||..:|:..  .|||:.:..||||:||.|.|||||:||.|||:.|.:        ..|.|.||:.
Yeast   638 LLTKVASSNVPVAPYEEVITHGFTLDENGLKMSKSVGNTISPEAIIRGDENLGLPALGVDGLRYL 702

  Fly   656 VA-SHGTQHMSITVSDKLLQQAAENLCKIRGTMRYLKGVIGEKQSGEKLIRTSDKSYLNRYLLSQ 719
            :| |:.|  ..|.....:::...|.|.|:|.|.|||...: :|.....|:.......:::|.|.:
Yeast   703 IAQSNFT--TDIVAGPTVMKHVGEALKKVRLTFRYLLSNL-QKSQDFNLLPIEQLRRVDQYTLYK 764

  Fly   720 LVEFESEVEKLYQAYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCGDDHELLAIRQ---TLTHC 781
            :.|......:.||.|.:::|:..:|..:.|::||.|..:.||.|| .:....||.||   ||.|.
Yeast   765 INELLETTREHYQKYNFSKVLITLQYHLNNELSAFYFDISKDILY-SNQISSLARRQVQTTLVHI 828

  Fly   782 YQQLCKSLWPIVPFLVEESWSYYDTTGGAFHEQIVQTNP---EWQ--DTKATEVINA--AFDVKR 839
            .......|.||:|.:|:|.|.|. ..|....::.:..||   :|.  |:. ||::.:  .|::|.
Yeast   829 LNAYRAILAPILPVMVQEVWKYI-PEGWLQGQEHIDINPMRGKWPFLDSN-TEIVTSFENFELKI 891

  Fly   840 L---------INQQAGDVNTWHLAVTIKGKERSQLDLLRELHSPLGESVSNSELCEILQVGSVTL 895
            |         ::.:.|...|.|..|||..|.          |.|.    |:.|||:|||..:|.:
Yeast   892 LKQFQEEFKRLSLEEGVTKTTHSHVTIFTKH----------HLPF----SSDELCDILQSSAVDI 942

  Fly   896 LQ---SHNS----------DLDIALSKLQISLCPRCRRYGLEDEQKTCQRCSDVME 938
            ||   ::||          ::.|.:.:.:...||||.:....:|.|.|.||.:.::
Yeast   943 LQMDDNNNSLPTIELGSGINVQILVERSKRHNCPRCWKANSAEEDKLCDRCKEAVD 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IleRS-mNP_648837.2 ileS 26..938 CDD:235588 349/1010 (35%)
nt_trans 75..>211 CDD:294020 67/140 (48%)
nt_trans <434..658 CDD:294020 94/251 (37%)
Anticodon_Ia_Ile_BEm 668..842 CDD:153414 51/192 (27%)
ISM1NP_015285.1 ileS 35..920 CDD:273054 317/908 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343002
Domainoid 1 1.000 424 1.000 Domainoid score I73
eggNOG 1 0.900 - - E1_COG0060
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7118
Inparanoid 1 1.050 520 1.000 Inparanoid score I192
Isobase 1 0.950 - 0 Normalized mean entropy S1385
OMA 1 1.010 - - QHG60783
OrthoFinder 1 1.000 - - FOG0003995
OrthoInspector 1 1.000 - - oto99966
orthoMCL 1 0.900 - - OOG6_101646
Panther 1 1.100 - - LDO PTHR42765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1444
SonicParanoid 1 1.000 - - X2759
TreeFam 1 0.960 - -
1615.740

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