DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IleRS-m and Iars1

DIOPT Version :9

Sequence 1:NP_648837.2 Gene:IleRS-m / 39762 FlyBaseID:FBgn0036569 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001094042.1 Gene:Iars1 / 306804 RGDID:621022 Length:1262 Species:Rattus norvegicus


Alignment Length:1016 Identity:270/1016 - (26%)
Similarity:426/1016 - (41%) Gaps:243/1016 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EEQERLVLENKIAVSYAYQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAH 111
            ||::.|...:|.   ..:||.....|.:|.|..:||||:|.|..|.||.:...:|||..|.....
  Rat    14 EEEKILQFWSKY---NCFQECLKQSKLRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQS 75

  Fly   112 GQRVNYIPGWDCHGLPIELKATST----APGQSAQ----EIRQKSRAFA------WEAIKSQKEE 162
            |..|:...||||||||:|.:...|    .|...|:    |..::.||..      |::..::   
  Rat    76 GFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSAEWKSTVTR--- 137

  Fly   163 FSSWGILANW-QKDNIYMTFQPEFIVNQLEMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEY 226
                  |..| ..||.|.|..|:|:.:...:|..||:||||||.:|.:.:|.:..|.|:..|...
  Rat   138 ------LGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESNQ 196

  Fly   227 DANHI-SPSVYVRFALNPSSFDVKDKQIYALVWTTTPWTLPSNQAICYNASLEYVIVRLSDRNQD 290
            :...: .|||:|.|.|.      :|:....:.|||||||||||.|:|.|..::|  |::.|.::.
  Rat   197 NYKDVQDPSVFVTFPLE------EDENTSLVAWTTTPWTLPSNLALCVNPEIQY--VKIKDVSRG 253

  Fly   291 ELY-LMASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPID-----KEQSNLPFFDASHVQDS 349
            :|: ||.:.|.|.::..:..  ||::...|..|....|....|     ||..........:|:|.
  Rat   254 KLFILMEARLSALYKQESDY--EILERFPGASLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKDE 316

  Fly   350 KGTGLVHTAPAHGPEDFLV----SLTQK--IPVKCFVNEEGTYTKEAPDFLRGKSVLDQGNSLVL 408
            :|||:||.||..|.:|..|    ::.||  .|| |.|:..|.:|:|...|: |:.|.|...::: 
  Rat   317 EGTGVVHQAPYFGADDHRVCMDFNIIQKDSAPV-CPVDASGCFTEEVTHFV-GQYVKDADKNII- 378

  Fly   409 DRIAED---VVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPAADALEQVEIYPRANAE 470
             |:.::   ::.:|...||||..||:..|:|.::...||:..|.:   ....|:..::.......
  Rat   379 -RMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVEHM---VDQLLKNNDLCYWVPEF 439

  Fly   471 ASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRESGKVVLNSALIEHLCNLLRKEGSIDFWWVK 535
            ..:|.....|::...|.|||.|.||.|||:..|.:..:||         |             :.
  Rat   440 VREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVV---------C-------------IG 482

  Fly   536 SVEELVPEHL----LRELHHEAKD------------LVKGTDILDIWFDSGSTWSAVLG------ 578
            ||.||  |.|    :.:||.|:.|            |.:.:::.|.||:|||...|.:.      
  Rat   483 SVAEL--EELSGTKISDLHRESIDHLTIPSRCGKGPLRRVSEVFDCWFESGSMPYAQVHYPFESK 545

  Fly   579 ---KDKI-ADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVIS 639
               :|.. ||...||.||..|||.:.|:::.|.....|:|.:.|:|..:...|.||||...|...
  Rat   546 REFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPD 610

  Fly   640 PKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAENL-CKIRGTMRYLKGVI--------- 694
            |..|..|||.||||.::           ::..:::  |||| .|..|....||.|:         
  Rat   611 PVSIINKYGADALRLYL-----------INSPVVR--AENLRFKEEGVRDVLKDVLLPWYNAYRF 662

  Fly   695 -------------GEKQSGEKLIRTS----DKSYLNRYLLSQLVEFESEVEKLYQAYEYNRVVAC 742
                         .|....|..:|.|    |:..|: ::.|.:..||:|:    .||....||..
  Rat   663 FIQNVFRLHKEEEVEFLYNEHTVRESPNITDRWILS-FMQSLIAFFETEM----AAYRLYTVVPR 722

  Fly   743 VQNFIANQVSAVYVHLIKDRLYCGDD--HELLAIRQTLTHCYQQLCKSLWPIVPFLVE------- 798
            :..|: :.::..||.:.:.||. |::  .:.:...:||......||:.:.|..|||.|       
  Rat   723 LVKFV-DILTNWYVRMNRRRLK-GENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLK 785

  Fly   799 ---ESWSYYDTTGGAFH--------EQIVQTNPE------------------------------- 821
               :..|..|....:.|        |:::....|                               
  Rat   786 LLIDPASIRDKDTLSIHYLMLPHVREELIDKKTENAVSRMQSVIELGRVIRDRKTIPIKYPLKEI 850

  Fly   822 ---WQDTKATEVINAAFDVKRLINQQAGDVNTWHLAV-TIKGKE----RSQLDLLRELHSPLG-- 876
               .||.:|.|      |:|.|......::|...:.: |.|.|.    |::.|     |..||  
  Rat   851 VVIHQDPEALE------DIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPD-----HMVLGKR 904

  Fly   877 ------------ESVSNSELCEILQVGSVTL--LQSHNSDL 903
                        :.:||.||.:..:.||:.:  .:.|..|:
  Rat   905 LKGAFKAVMVAVKQLSNEELEQFQKSGSIVVEGHELHEEDI 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IleRS-mNP_648837.2 ileS 26..938 CDD:235588 270/1016 (27%)
nt_trans 75..>211 CDD:294020 51/150 (34%)
nt_trans <434..658 CDD:294020 71/249 (29%)
Anticodon_Ia_Ile_BEm 668..842 CDD:153414 50/254 (20%)
Iars1NP_001094042.1 PLN02882 6..1070 CDD:215477 270/1016 (27%)
IleRS_core 39..>181 CDD:173909 51/150 (34%)
IleRS_core <406..640 CDD:173909 75/273 (27%)
Anticodon_Ia_Ile_ABEc 640..833 CDD:153415 39/199 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0060
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60783
OrthoDB 1 1.010 - - D101703at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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