DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and JMJ18

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_174367.6 Gene:JMJ18 / 839963 AraportID:AT1G30810 Length:819 Species:Arabidopsis thaliana


Alignment Length:289 Identity:61/289 - (21%)
Similarity:101/289 - (34%) Gaps:70/289 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 YQPTLGTDMGTMQERITSTR---------------NGSITSVQAVYV-PADDLSDPAPAA-TFSH 422
            :.|::..|.|....|:....               |......:||.| |.|.|:....|. .:|.
plant   364 FSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSK 428

  Fly   423 LDATTVLSRPIAELG-IYPAVDPL---------DSSSRILDPDVVGEEHYNVARAVQKTLQAYKS 477
            ....|.||.....|| .|.||..|         ::::.:......| ::..:..|:|..||..:.
plant   429 ETRKTSLSHDKLLLGAAYEAVKALWELSASEGKENTTNLRWKSFCG-KNGTLTNAIQARLQMEEG 492

  Fly   478 LQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIF--------TGHPGKLVPVE-KCV- 532
            .   |..||.|..|         .:||::......: .|.|        :....|..|.| .|: 
plant   493 R---ITALGRDSSS---------LKKMEKDFDSNCE-RECFSCFYDLHLSASGCKCSPEEYACLK 544

  Fly   533 -----------EGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLAASMSGDAPPAKAEAKKDE 586
                       :|| .||....|::..:...:.|:::::...|:::......|....|..:...|
plant   545 HADDLCSCDVKDGF-ILLRYTMDELSSLVRALEGESDDLKIWASKVLGIEHSDEDQTKTSSVISE 608

  Fly   587 KKDTKPEEGKKE-----EPPKGEDKKEEA 610
            :|  |.:||..:     |....||.||||
plant   609 EK--KLKEGSFDLNIDLEMDYQEDVKEEA 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 47/242 (19%)
JMJ18NP_174367.6 JmjN 59..99 CDD:128818
JmjC 294..410 CDD:396791 7/45 (16%)
zf-C5HC2 519..571 CDD:460750 10/52 (19%)
FYRN 658..702 CDD:128814
FYRC 708..794 CDD:197781
Blue background indicates that the domain is not in the aligned region.

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