DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and AT5G08680

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_680155.1 Gene:AT5G08680 / 830769 AraportID:AT5G08680 Length:559 Species:Arabidopsis thaliana


Alignment Length:492 Identity:342/492 - (69%)
Similarity:407/492 - (82%) Gaps:11/492 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AEDECEEKKSDGGGKKLESKGRKGVIHAVIGPVIDVYFEEE--VPEVLNALQVQDAPIANLVLEV 143
            |:|| .:|..|.||     ||..|.:..|||.::||.||::  :|.::.:|:|||.| ..|||||
plant    70 AKDE-GKKTYDYGG-----KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHP-TRLVLEV 127

  Fly   144 FHHLGNNIVRCVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYS 208
            .||||.|:||.:|||.||||.||:.||:||.||.|.||:|.||||:||:|:|||:|||:|::.|.
plant   128 SHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYL 192

  Fly   209 FIHNEAPELTDLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGG 273
            .||.:||.|.||:...|||.|||||:||||||.:||||||||||||||||||||||||:||:|||
plant   193 PIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257

  Fly   274 YSVFVGAGERTREGNDLYHEMIESKVISL--EDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEY 336
            :|||.|.|||||||||||.|||||.||.|  :...||..||:||||||||||:||.|||||:|||
plant   258 FSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEY 322

  Fly   337 FRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSV 401
            |||.:|||||||||||||||||.||||||||||||||||||||.:|:|.:|||||:|:.||||||
plant   323 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKGSITSV 387

  Fly   402 QAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVAR 466
            ||:|||||||:|||||.||:||||||||||.|:|||||||||||||:||:|.|.::||||||.||
plant   388 QAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTAR 452

  Fly   467 AVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKC 531
            .|||.||.||:|||||||||||||||:||||||||||:||||||||.|||||||.|||.|.:::.
plant   453 GVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKEN 517

  Fly   532 VEGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLA 568
            :..|:.||:|:|||:.|.:|||||..:||:|||.::|
plant   518 INSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIA 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 333/470 (71%)
AT5G08680NP_680155.1 Synthase_beta 1..50 CDD:463277
AtpD 85..557 CDD:439825 333/471 (71%)
Blue background indicates that the domain is not in the aligned region.

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