DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbetaL and ELF6

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_196044.2 Gene:ELF6 / 830303 AraportID:AT5G04240 Length:1340 Species:Arabidopsis thaliana


Alignment Length:664 Identity:122/664 - (18%)
Similarity:220/664 - (33%) Gaps:190/664 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KTDAELVKKKDEAEDECEEKKSDGG--------------GKKLESKG------------RKGVIH 107
            :|||:.:......:.:||.|.|...              .:.|:|:|            :|...|
plant   621 ETDAQEIMTLSSEKSDCEWKTSSRYIRPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQKFKAH 685

  Fly   108 AVIGPVIDVYFEEEVP-----EVLNALQVQDAPIANLVL---EVFHH-------LGNNIVRCVAM 157
            |.|     |..|.:||     .:|.:...::..:.:|.:   |.:.|       ||.|:..||.:
plant   686 AAI-----VAEEVKVPFSYDDVLLESASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRYCVKV 745

  Fly   158 DSTEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPID----------DRGEVK-SDFYSFIH 211
            ......::.|..|.             ||.:.:.....:|          .|.:.| |...||..
plant   746 RKNSPTKKIQHALS-------------LGGLFSDTSQMLDFTTIRWLQRKSRSKAKPSSTSSFTP 797

  Fly   212 NEAPEL-TDLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYS 275
            .|..|: .|..::..:.....|..:.:..|.:..|:.....|...:.:..:....:..|:...:|
plant   798 CEHLEVKADGKLRDNLDSQTGKKEEKIIQYSRKKKLNPKPSAEQVQELATLAKSKDFDKTCKNFS 862

  Fly   276 VFVGAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTG-----LTIAE 335
                    :|...|   ..|.|::.|...||.:|:.|...:|  |.:.|..|..|     :|: :
plant   863 --------SRSHLD---SAIRSEMNSEIGDSGRVIGVSFSIN--PCSSSFTVGHGQEHPEITV-K 913

  Fly   336 YFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGS--- 397
            :..|:||.     :.|........|....|     :::..:...|..|       ||..|||   
plant   914 FGSDLDGN-----VTNSLSMVNGDSADLTL-----TSISREQHQGHSM-------TSNNNGSNSG 961

  Fly   398 --ITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLD---SSSRILDPDVV 457
              :.:.|.:.|...|..| .|    ..|....|.| .::..||..||:..|   ...|....::.
plant   962 SHVVASQTILVSTGDNHD-GP----RKLSGDYVCS-DVSVRGIQEAVEMSDQEFGEPRSTVTNIE 1020

  Fly   458 GEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHP 522
            .|:...:.:..|:.           |:.|..|..|..:....|    :...|:.....|..:.|.
plant  1021 DEQQSQIVKPTQRE-----------AVFGDHEQVEGAEAVSTR----ENLCSEIILHTEHSSAHV 1070

  Fly   523 GKLVP-VEKCVEGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLAASMSG------------- 573
            |..:| :....|..  :::..:|..|.       ::.::|:.:....||.:|             
plant  1071 GMEIPDINTASENL--VVDMTHDGEPL-------ESSDILSSSNGDEASSNGLQVLNDELSMESE 1126

  Fly   574 ----------DAPPAKAEAKKDEKKDTKPE---------------------EGKKEEPPKGEDKK 607
                      :||.:..||||..|.:::.|                     .||::...:...|.
plant  1127 VSSSENTEVIEAPNSMGEAKKKRKIESESETNDNPESSIGFIRSPCEGLRSRGKRKATCETSLKH 1191

  Fly   608 EEAKDDKPKEPEKK 621
            .|..|::.|...|:
plant  1192 TETSDEEKKPIAKR 1205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 94/507 (19%)
ELF6NP_196044.2 JmjN 17..50 CDD:460542
JmjC 292..411 CDD:396791
C2H2 Zn finger 1230..1255 CDD:275368
C2H2 Zn finger 1253..1275 CDD:275368
C2H2 Zn finger 1283..1305 CDD:275368
C2H2 Zn finger 1313..1333 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.