DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and JMJ14

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_193773.2 Gene:JMJ14 / 827788 AraportID:AT4G20400 Length:954 Species:Arabidopsis thaliana


Alignment Length:630 Identity:123/630 - (19%)
Similarity:195/630 - (30%) Gaps:217/630 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LHASLSLWD-DKDKKKSGDECEPEP-----QEVCKTDAEL---VKKKDEAEDECEEKKSDGGG-K 95
            :.|:..||: ...|||:       |     :.||..|..|   |||:.:.|:|......||.. :
plant   448 MEATYCLWELSLSKKKT-------PVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLR 505

  Fly    96 KLESKGRKGVIHAVIGPVIDVYFEEE-----VPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCV 155
            |:|..             .|...|.|     ....::|...:.:|  |....:.|  ..::..|.
plant   506 KMEGD-------------FDNKRERECFLCFYDLHMSASSCKCSP--NRFACLIH--AKDLCSCE 553

  Fly   156 AMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDL 220
            :.|....:|.   .||..:    |:.:|:.|.:     |.||.......|.|...|..|.|...|
plant   554 SKDRYILIRH---TLDELW----ALVRALEGDL-----DAIDLWASKCRDQYPSQHPRAREYAYL 606

  Fly   221 SVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTR 285
            ...|.|                                          ||.|...|      :.|
plant   607 KSAPCI------------------------------------------KSRGSSKV------QQR 623

  Fly   286 EGND-------LYHEMIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDV--- 340
            |.|:       |..::..:|.:.|:.|....|...|..:|    |:.|  .|:|......||   
plant   624 EQNNLQLVSERLQSDLTSNKEVQLKQDGDSDVNRHGHESE----RNHV--HGITDKSAVTDVKLG 682

  Fly   341 -----DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERITST----RNG 396
                 |.:.:.:...|....:..|  .|.|..::...:|     |.|......|::.:    .:|
plant   683 VGGKFDEKKISVESQNPHSVSDVG--CSELAKKVDGCLG-----GKDQNAATNRLSLSVELLSSG 740

  Fly   397 SIT------SVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSS---SRIL 452
            |:.      |.||:|          |....|.:...:||             ||.:.:   |.:|
plant   741 SLVVKKLWCSKQAIY----------PKGFKSRVKFLSVL-------------DPTNLTNYISEVL 782

  Fly   453 DPDVVG------------EEHYNVA--RAVQKTLQAYK---------------SLQDIIAILGMD 488
            |..::|            |...||:  :..|...|..|               |||.:.:|.|::
plant   783 DAGLLGPLFRVSVEDYPTENFSNVSAEKCWQMVTQRLKLEIIKKCDQPVSSLTSLQPLESINGLE 847

  Fly   489 ELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYM 553
            ...    .......|:...|....|:.|.:.....||...|...|       ||.||..:     
plant   848 MFG----FLSPHVIKVVEALDPKHQLEEYWNQKAVKLFGAEPIKE-------GEKDDTEK----- 896

  Fly   554 VGDAEEVLAKATQLAASMSGDAPPAK---------AEAKKDEKKD 589
            .|.::..|.:.|:|...:...|.|.:         .|.:..|.|:
plant   897 GGASDPSLDRDTRLLRGLLKKATPEELVMMHGLLCGETRNTELKE 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 98/528 (19%)
JMJ14NP_193773.2 JmjC 296..412 CDD:396791
zf-C5HC2 519..571 CDD:460750 9/62 (15%)
FYRN 743..784 CDD:470644 12/63 (19%)
FYRC 790..876 CDD:197781 15/89 (17%)
JmjN 56..96 CDD:128818
Blue background indicates that the domain is not in the aligned region.

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