DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and KDM5C

DIOPT Version :9

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_004178.2 Gene:KDM5C / 8242 HGNCID:11114 Length:1560 Species:Homo sapiens


Alignment Length:742 Identity:147/742 - (19%)
Similarity:236/742 - (31%) Gaps:246/742 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ARIGLKMGPGTGGY------RGNYLGNPVVFPRYLHASL--SLWDDKDKKK-------------- 55
            ||..|...|.:.|.      ||..||..|...:.|...:  :.|.|:.|:.              
Human   887 AREALASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMR 951

  Fly    56 ----SGDECEPEPQEVCKTDAEL------VKKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAVI 110
                :|....|.| .|.|..|||      .::.:|....|.|.:         .|.....:.|:|
Human   952 GLLVAGASVAPSP-AVDKAQAELQELLTIAERWEEKAHLCLEAR---------QKHPPATLEAII 1006

  Fly   111 GPVIDVYFEEEVPEVLNALQVQDAPIANL---VLEVFHHLGNNIVRCVAMDSTEGL---RRGQPV 169
            ...      |.:|..|..:|.....:|..   :.:|......:...|  :|..|||   .|..||
Human  1007 REA------ENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC--LDDLEGLVAVGRDLPV 1063

  Fly   170 -----------LDTGYPIRVAVGKAVLGR-----ILNVVGDPIDDRGEVKSDFYSFIHNEAPELT 218
                       :.|.:..|....|..|.:     :|.|: .|..|.|...:....::..|     
Human  1064 GLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVL-CPCADAGSDSTKRSRWMEKE----- 1122

  Fly   219 DLSV-KPEILVTGIKVIDLLAPYVKGGKIGLF--GGAGVGKTVLIMELINN-----IAKSHGGYS 275
             |.: |.:..:.|:...||..|   |..|..|  |.....:.:|.:...|:     :|.|....|
Human  1123 -LGLYKSDTELLGLSAQDLRDP---GSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASS 1183

  Fly   276 ---------VFVGAGERTREGNDLYHEMIESKVISL--------EDDSSKVVLVFGQMNE----P 319
                     |..|||...   .||..:....:.:|:        .:.:|..:|.:.:.:.    |
Human  1184 TTSICVCGQVLAGAGALQ---CDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCP 1245

  Fly   320 PGARSR-----------VVLTGLTIAEYFRDVDGQDVLLFIDNIF------RFTQAGSEVSALLG 367
            ...|||           |.|..|.:    |..:|:.:....:...      |...|..:|:||||
Human  1246 LCMRSRRPRLETILALLVALQRLPV----RLPEGEALQCLTERAISWQGRARQALASEDVTALLG 1306

  Fly   368 RI-------------------PSAVGYQPT---LGTDMGTMQERITSTRNG-SITSVQAVYVPAD 409
            |:                   |:|....|.   .|.||..:|..:   .|| |:||.:.| .|.:
Human  1307 RLAELRQRLQAEPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLL---ENGDSVTSPEKV-APEE 1367

  Fly   410 D--------LSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV----VGEEHY 462
            .        ||...|..|...|:.......|:.||              :::.|:    :.|.| 
Human  1368 GSGKRDLELLSSLLPQLTGPVLELPEATRAPLEEL--------------MMEGDLLEVTLDENH- 1417

  Fly   463 NVARAVQKTLQAYK--SLQDIIAILGMDELSEEDKLTVARA------RKMQRFLSQPFQVAEIFT 519
                ::.:.|||.:  .|:.|..:|.:::..........||      ||:.|             
Human  1418 ----SIWQLLQAGQPPDLERIRTLLELEKAERHGSRARGRALERRRRRKVDR------------- 1465

  Fly   520 GHPGKLVPVEKCVEGFKRLLNGEYDD------IPEIAFYMVGDAEEVLAKATQLAASMSGDAPPA 578
                                .||.||      .|:.......:|||| .:..:|.....|:.|||
Human  1466 --------------------GGEGDDPAREELEPKRVRSSGPEAEEV-QEEEELEEETGGEGPPA 1509

  Fly   579 K-----AEAKKDEKKDTKPEEGKKEEP 600
            .     :.:.::.:...:|.||....|
Human  1510 PIPTTGSPSTQENQNGLEPAEGTTSGP 1536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 112/581 (19%)
ATP-synt_ab_N 106..173 CDD:280947 16/83 (19%)
F1-ATPase_beta 175..454 CDD:238553 72/360 (20%)
ATP-synt_ab_C 462..571 CDD:278722 21/122 (17%)
KDM5CNP_004178.2 JmjN 13..54 CDD:128818
BRIGHT 80..170 CDD:128777
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..227
PHD1_KDM5C_5D 326..371 CDD:277077
JmjC 501..617 CDD:202224
zf-C5HC2 707..759 CDD:280996
PLU-1 772..1098 CDD:285609 46/228 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1161..1181 4/19 (21%)
PHD2_KDM5C_5D 1187..1247 CDD:277081 10/62 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1316..1371 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1444..1560 23/127 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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