DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and MEE27

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_181034.1 Gene:MEE27 / 818053 AraportID:AT2G34880 Length:806 Species:Arabidopsis thaliana


Alignment Length:494 Identity:100/494 - (20%)
Similarity:167/494 - (33%) Gaps:163/494 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 VGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI---DLLAPYVKGGKIGLFGGAG 253
            ||||..:  |::.:::..|..|..|              :||:   ||..|.:         |:|
plant   206 VGDPSVE--EIEGEYWRIIEKETNE--------------VKVLYGTDLENPIL---------GSG 245

  Fly   254 VGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNE 318
            ..|.|.|....|::.|       ::.:|...   |:|  ..::..::|.||            .|
plant   246 FSKGVKIPTRRNDMDK-------YISSGWNL---NNL--ARLQGSLLSFED------------CE 286

  Fly   319 PPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQ-------AGSEVS----ALLGRIPSA 372
            ..|.:...:..|:..:.:...|  :|..|:..|...|.:       .||..:    |:...:|..
plant   287 ISGVQVPWLYVGMCFSTFCWHV--EDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHLPDL 349

  Fly   373 VGYQPTLGTDMGTMQERITSTRNGSITSVQAV-----YV------------------------PA 408
            ...||.|..::.| |...|..:|..:...:||     ||                        |.
plant   350 FDEQPDLLHELVT-QFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAEAVNVAPV 413

  Fly   409 DDLSDPAPAA-TFSHLDATTVLSRPIAELG-IYPAVDPL-----DSSSRILDPDVVGEEHYNVAR 466
            |.|:....|. .:|.....|.||.....|| .:.||..|     |::.|.......|::.. :.:
plant   414 DWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKSLSAHGEDNTKRFSWKRFCGKDGI-ITK 477

  Fly   467 AVQKTL----QAYKSLQDIIAILGMDE------------------LS----------EE---DKL 496
            |::..|    :..::|.:..:::.||:                  ||          ||   .|.
plant   478 AIEARLRMEEKRIEALGNGFSLVKMDKDFDSNCERECISCFSDLHLSATGCKNCSSLEEYGCTKH 542

  Fly   497 TVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPE-IAFYMVGDAEEV 560
            .:.......||:...:.:.|:     ..||          |.|.||.||:.. ::..|.|.:|  
plant   543 DICSCEGKDRFIFLRYTIDEL-----SSLV----------RALEGESDDLKAWLSKVMEGCSE-- 590

  Fly   561 LAKATQLAASMSGDAPPAKAEAKKDEKKDTKPEEGKKEE 599
                ||...| ||..  .|.:..::|..|...|..|..|
plant   591 ----TQKGES-SGII--VKEKQVQEECFDLNGECNKSSE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 91/463 (20%)
MEE27NP_181034.1 JmjN 60..101 CDD:128818
JmjC 294..410 CDD:396791 21/118 (18%)
zf-C5HC2 514..566 CDD:460750 8/56 (14%)
FYRN 643..687 CDD:128814
FYRC 693..781 CDD:197781
Blue background indicates that the domain is not in the aligned region.

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