DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and KDM5A

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001036068.1 Gene:KDM5A / 5927 HGNCID:9886 Length:1690 Species:Homo sapiens


Alignment Length:302 Identity:66/302 - (21%)
Similarity:104/302 - (34%) Gaps:85/302 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 QAGSE-----VSALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLSDPAP 416
            ||..|     :||.|.:..:    .|.|...:.:.|:   |..|..::||.:           :|
Human  1286 QAAREKTEKIISAELQKAAA----NPDLQGHLPSFQQ---SAFNRVVSSVSS-----------SP 1332

  Fly   417 AATFSHLDATTVLSRPIAELGIYPAVDPLD-SSSRILDPDVVGEEHYNVARAVQKT--------- 471
            ..|..:.|..|.....|.|...|...|... .||..|:|::..:|...:......|         
Human  1333 RQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIPIKSEEVVTHMWTAPSFC 1397

  Fly   472 -LQAYKSLQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGF 535
             ..||.|     |.....:.|...:....::..:.|.|..|  |.|:   .||....:|:.:   
Human  1398 AEHAYSS-----ASKSCSQGSSTPRKQPRKSPLVPRSLEPP--VLEL---SPGAKAQLEELM--- 1449

  Fly   536 KRLLNGEYDDIPEIAFYMVGDAEEVLAKATQ-LAASMSGDAPPAK---AEAKKDEKKDTKP---- 592
                             ||||..||....|| :...:....||::   ....:|:..:.||    
Human  1450 -----------------MVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKVK 1497

  Fly   593 -----EEGKKEEPPK-----GEDK---KEEAKDDKPKEPEKK 621
                 |:.:|.:..|     ||.|   ||..|.|||::.:.|
Human  1498 GKDSSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLK 1539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 48/229 (21%)
KDM5ANP_001036068.1 JmjN 18..59 CDD:128818
ARID_KDM5A 84..175 CDD:350637
PHD1_KDM5A 295..343 CDD:277075
GSGFP motif. /evidence=ECO:0000250|UniProtKB:Q3UXZ9 419..423
JmjC 470..586 CDD:396791
zf-C5HC2 676..728 CDD:460750
PLU-1 741..1072 CDD:462475
PHD2_KDM5A 1163..1215 CDD:277079
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1327..1348 6/31 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1407..1433 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1490..1509 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1516..1543 10/24 (42%)
PHD3_KDM5A 1608..1659 CDD:277156
Interaction with LMO2. /evidence=ECO:0000269|PubMed:9129143 1623..1690
Blue background indicates that the domain is not in the aligned region.

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