DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and atp5f1b

DIOPT Version :9

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001019600.2 Gene:atp5f1b / 554135 ZFINID:ZDB-GENE-030131-124 Length:517 Species:Danio rerio


Alignment Length:469 Identity:358/469 - (76%)
Similarity:406/469 - (86%) Gaps:1/469 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 GVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQP 168
            |.|.||||.|:||.|:|.:|.:||||:|.... :.|||||..|||.|.||.:|||.||||.|||.
Zfish    50 GRIVAVIGAVVDVQFDEGLPPILNALEVAGRD-SRLVLEVAQHLGENTVRTIAMDGTEGLVRGQK 113

  Fly   169 VLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKV 233
            |||||.|||:.||...||||:||:|:|||:||.:.:...:.||.||||.||:||:.|||||||||
Zfish   114 VLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTKQTAPIHAEAPEFTDMSVEQEILVTGIKV 178

  Fly   234 IDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESK 298
            :||||||.|||||||||||||||||||||||||:||:|||||||.|.|||||||||||||||||.
Zfish   179 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESG 243

  Fly   299 VISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVS 363
            ||:|:|.:|||.||:||||||||||:||.|||||:||||||.:||||||||||||||||||||||
Zfish   244 VINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 308

  Fly   364 ALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTV 428
            ||||||||||||||||.|||||||||||:|:.||||||||:|||||||:|||||.||:|||||||
Zfish   309 ALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 373

  Fly   429 LSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEE 493
            |||.|||||||||||||||:|||:||::||.|||:|||.|||.||.|||||||||||||||||||
Zfish   374 LSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYDVARGVQKILQDYKSLQDIIAILGMDELSEE 438

  Fly   494 DKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAE 558
            ||||||||||:||||||||||||:||||.|||||:::.::|||.:|.||||.:||.||||||..|
Zfish   439 DKLTVARARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFKSILGGEYDALPEQAFYMVGPIE 503

  Fly   559 EVLAKATQLAASMS 572
            ||:.||.:||...|
Zfish   504 EVVQKAEKLAEEHS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 355/463 (77%)
ATP-synt_ab_N 106..173 CDD:280947 40/66 (61%)
F1-ATPase_beta 175..454 CDD:238553 226/278 (81%)
ATP-synt_ab_C 462..571 CDD:278722 82/108 (76%)
atp5f1bNP_001019600.2 PRK09280 49..513 CDD:236447 355/463 (77%)
ATP-synt_ab_N 52..118 CDD:280947 40/66 (61%)
F1-ATPase_beta 120..399 CDD:238553 226/278 (81%)
ATP-synt_ab_C 407..515 CDD:278722 82/107 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592253
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D278669at33208
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - O PTHR15184
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.720

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