DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and ATPsynbeta

DIOPT Version :9

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster


Alignment Length:465 Identity:354/465 - (76%)
Similarity:405/465 - (87%) Gaps:1/465 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 GVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQP 168
            |.|.||||.|:||.|::.:|.:||||:| |.....|||||..|||.|.||.:|||.||||.|||.
  Fly    44 GKIVAVIGAVVDVQFDDNLPPILNALEV-DNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQK 107

  Fly   169 VLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKV 233
            |||||||||:.||...||||:||:|:|||:||.:.:|..:.||.||||...:||:.|||||||||
  Fly   108 VLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKV 172

  Fly   234 IDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESK 298
            :||||||.|||||||||||||||||||||||||:||:|||||||.|.|||||||||||:||||..
  Fly   173 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGG 237

  Fly   299 VISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVS 363
            ||||:|.:|||.||:||||||||||:||.|||||:||||||.:||||||||||||||||||||||
  Fly   238 VISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 302

  Fly   364 ALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTV 428
            ||||||||||||||||.||||:||||||:|:.||||||||:|||||||:|||||.||:|||||||
  Fly   303 ALLGRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 367

  Fly   429 LSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEE 493
            |||.|||||||||||||||:|||:||:::|:|||||||.|||.||.|||||||||||||||||||
  Fly   368 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEE 432

  Fly   494 DKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAE 558
            ||||||||||:||||||||||||:||||.|||||:|:.::||..:|.|:||.:||:||||||..|
  Fly   433 DKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIE 497

  Fly   559 EVLAKATQLA 568
            ||:.||.:||
  Fly   498 EVVEKADRLA 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 352/463 (76%)
ATP-synt_ab_N 106..173 CDD:280947 40/66 (61%)
F1-ATPase_beta 175..454 CDD:238553 223/278 (80%)
ATP-synt_ab_C 462..571 CDD:278722 82/107 (77%)
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 352/463 (76%)
ATP-synt_ab_N 46..112 CDD:280947 40/66 (61%)
F1-ATPase_beta 114..393 CDD:238553 223/278 (80%)
ATP-synt_ab_C 401..508 CDD:278722 82/107 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464267
Domainoid 1 1.000 175 1.000 Domainoid score I1096
eggNOG 1 0.900 - - E1_COG0055
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 586 1.000 Inparanoid score I11
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D27491at7147
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - otm51317
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - P PTHR15184
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1349
1211.810

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