DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and atp5f1b

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001001256.1 Gene:atp5f1b / 407968 XenbaseID:XB-GENE-943110 Length:525 Species:Xenopus tropicalis


Alignment Length:513 Identity:362/513 - (70%)
Similarity:417/513 - (81%) Gaps:19/513 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CEPEPQEVCKTDAELVKKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAVIGPVIDVYFEEEVPE 124
            |.|         |.|..::|.|      .::....|...:.||   |.||||.|:||.|:|.:|.
 Frog    32 CSP---------AALHSRRDYA------AQTSAAAKPGTAVGR---IVAVIGAVVDVQFDEGLPP 78

  Fly   125 VLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRIL 189
            :||||:||... ..|||||..|||.|.||.:|||.||||.|||.|||.|.|||:.||...||||:
 Frog    79 ILNALEVQGRD-TRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDAGTPIRIPVGPETLGRIM 142

  Fly   190 NVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGV 254
            ||:|:|||:||.:.:..::.||.||||..::||:.|||||||||:||||||.|||||||||||||
 Frog   143 NVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 207

  Fly   255 GKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNEP 319
            ||||||||||||:||:|||||||.|.|||||||||||||||||.||:|:|.:|||.||:||||||
 Frog   208 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEP 272

  Fly   320 PGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMG 384
            ||||:||.|||||:||||||.:||||||||||||||||||||||||||||||||||||||.||||
 Frog   273 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 337

  Fly   385 TMQERITSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSS 449
            |||||||:|:.||||||||:|||||||:|||||.||:||||||||||.|||||||||||||||:|
 Frog   338 TMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 402

  Fly   450 RILDPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQV 514
            ||:||::||.|||.|||.|||.||.|||||||||||||||||||||||||||||:||||||||||
 Frog   403 RIMDPNIVGLEHYEVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 467

  Fly   515 AEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLAASMS 572
            ||:||||.|||||::..::|||::|:|.||::||.||||||..||.:.||.:||...|
 Frog   468 AEVFTGHLGKLVPLKDTIKGFKQILHGGYDNLPEQAFYMVGPIEEAVTKAEKLAEEHS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 352/466 (76%)
atp5f1bNP_001001256.1 AtpD 56..523 CDD:439825 354/470 (75%)

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