DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and Kdm6a

DIOPT Version :9

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_006527657.1 Gene:Kdm6a / 22289 MGIID:1095419 Length:1476 Species:Mus musculus


Alignment Length:711 Identity:120/711 - (16%)
Similarity:211/711 - (29%) Gaps:274/711 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VSWAKMATACARIGLKMGPGTGGYRGNYLGNPVVFPRYLHASLSLWDDKDKKKSGDECEPEPQEV 67
            ||...:.|||.|..|..||.:.|                |...|                ..:.:
Mouse   605 VSQPGVHTACPRQTLANGPFSAG----------------HVPCS----------------TSRTL 637

  Fly    68 CKTDAELVKKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAVIGPVIDVYFEEEVPEV----LNA 128
            ..||..|:                 |...:...|..|.:         .|.:...|.:    .|.
Mouse   638 GSTDTVLI-----------------GNNHVTGSGSNGNV---------PYLQRNAPTLPHNRTNL 676

  Fly   129 LQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRG-----------QPVLDTGYPIRVAVGK 182
            ....:.|..|       .|.|         ||:||.:|           :|:..|| |       
Mouse   677 TSSTEEPWKN-------QLSN---------STQGLHKGPSSHLAGPNGERPLSSTG-P------- 717

  Fly   183 AVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVIDLLAPY--VKGGK 245
               .:.|...|..|.::            |..|.|      |...||....::.|:.:  ..||:
Mouse   718 ---SQHLQAAGSGIQNQ------------NGHPTL------PSNSVTQGAALNHLSSHTATSGGQ 761

  Fly   246 IGLF---GGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVISLEDDSS 307
            .|:.   .....|.|:.:.|......::....:...|.....       |:::...|.|.....|
Mouse   762 QGITLTKESKPSGNTLTVPETSRQTGETPNSTASVEGLPNHV-------HQVMADAVCSPSHGDS 819

  Fly   308 KVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVSALL-GRIPS 371
            |          .||                        ||..||        .::|||| |:..:
Mouse   820 K----------SPG------------------------LLSSDN--------PQLSALLMGKANN 842

  Fly   372 AVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLS--DPAPAAT-FSHLDATTVLSRPI 433
            .||  |.....:..:...:.:..:.|:.|     .|:..:|  .|:|.:| .:..::.|.|:.|.
Mouse   843 NVG--PGTCDKVNNIHPTVHTKTDNSVAS-----SPSSAISTATPSPKSTEQTTTNSVTSLNSPH 900

  Fly   434 AEL------GIYPAVDPLDSSSRIL----DPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMD 488
            :.|      |:..:..|:.:...::    .|.::.....::..:..:.|:|.::       ||.:
Mouse   901 SGLHTINGEGMEESQSPIKTDLLLVSHRPSPQIIPSMSVSIYPSSAEVLKACRN-------LGKN 958

  Fly   489 ELSE----------------------EDKL-----TVARARK-------MQRFLSQPFQVAEIFT 519
            .||.                      :|||     ::....|       :.:|.:.|.....:..
Mouse   959 GLSNSSILLDKCPPPRPPSSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIR 1023

  Fly   520 GHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAEE--------------------VLAKA 564
            |..|.| .::..:...|.|:....:.:.|:...::..|:|                    .:||.
Mouse  1024 GLAGAL-KLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTTIAKY 1087

  Fly   565 TQLAASMSGDAPPAKAEAKKDEKKDTKPEE-------GKKEEPP-----------KGEDKK 607
            .|..||...::...:.| |:...||....|       ||:.:.|           ..:|||
Mouse  1088 AQYQASSFQESLREENE-KRSHHKDHSDSESTSSDNSGKRRKGPFKTIKFGTNIDLSDDKK 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 90/552 (16%)
ATP-synt_ab_N 106..173 CDD:280947 13/81 (16%)
F1-ATPase_beta 175..454 CDD:238553 50/297 (17%)
ATP-synt_ab_C 462..571 CDD:278722 24/162 (15%)
Kdm6aXP_006527657.1 TPR repeat 95..123 CDD:276809
TPR 108..401 CDD:223533
TPR repeat 131..161 CDD:276809
TPR repeat 166..196 CDD:276809
TPR repeat 207..235 CDD:276809
TPR repeat 287..314 CDD:276809
TPR repeat 319..349 CDD:276809
TPR repeat 354..380 CDD:276809
JmjC 1151..1215 CDD:214721
JmjC 1185..1293 CDD:334913
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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