DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and Kdm5c

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001390000.1 Gene:Kdm5c / 20591 MGIID:99781 Length:1554 Species:Mus musculus


Alignment Length:295 Identity:56/295 - (18%)
Similarity:93/295 - (31%) Gaps:121/295 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 AGSEVSALLGRI-------------PSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPAD 409
            |..||:|||||:             ..::.| |:.|.: ||          |::..||.:....|
Mouse  1297 ASEEVTALLGRLAELRQRLQAESKPEESLAY-PSDGGE-GT----------GNMPKVQGLLENGD 1349

  Fly   410 DLSDPAPAATFSHLDATTV---------LSRPIAELGIYPAVDPLDSSSRILDPDV----VGEEH 461
            .::.|...||........:         ||.|:.||   |..........:::.|:    :.|.|
Mouse  1350 SVTSPEKVATEEGSGKRDLELLSSILPQLSGPVLEL---PEATRAPLEELMMEGDLLEVTLDENH 1411

  Fly   462 YNVARAVQKTLQAYK--SLQDIIAILGMDELSEEDKLTVARA------RKMQRFLSQPFQVAEIF 518
                 ::.:.|||.:  .|:.:..:|.:::.......|..||      ||:.|            
Mouse  1412 -----SIWQLLQAGQPPDLKRVQTLLELEKAERHGSRTRGRALERRRRRKVDR------------ 1459

  Fly   519 TGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLAASMSGDAPPAKAEAK 583
                                 .||.||                               ||:.|.:
Mouse  1460 ---------------------GGEPDD-------------------------------PAREELE 1472

  Fly   584 KDEKKDTKPEEGKKEEPPKGEDKKEEAKDDKPKEP 618
            ....:.:.||   .||..:.|:.:||...:.|..|
Mouse  1473 PKRVRSSGPE---AEEVQEEEELEEETGGEVPPVP 1504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 44/245 (18%)
Kdm5cNP_001390000.1 JmjN 13..54 CDD:128818
ARID_KDM5C_5D 79..170 CDD:350639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..227
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303
PHD1_KDM5C_5D 326..371 CDD:277077
JmjC 501..617 CDD:396791
zf-C5HC2 707..759 CDD:460750
PLU-1 772..1100 CDD:462475
PHD_SF 1187..1247 CDD:473978
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1319..1364 12/56 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1437..1535 22/135 (16%)
Blue background indicates that the domain is not in the aligned region.

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