DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and jmjd-3.2

DIOPT Version :9

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_510405.1 Gene:jmjd-3.2 / 181543 WormBaseID:WBGene00009089 Length:867 Species:Caenorhabditis elegans


Alignment Length:530 Identity:100/530 - (18%)
Similarity:161/530 - (30%) Gaps:205/530 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAV-----------------IGPVIDVYFEEEVP 123
            |:|.|...|.:.||......:..:|..:..||.|                 .|.:::   .||..
 Worm   209 KRKPETLIETKSKKRKSARGRPSNKLNQFQIHQVSSDWNANAFLQFARRDAAGTILE---SEEAK 270

  Fly   124 EVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRI 188
            :.::|           .||.|                     .:|...|...:.|......||.:
 Worm   271 KTIDA-----------QLEHF---------------------SEPSCSTDVSVHVVRDNENLGLV 303

  Fly   189 LNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAG 253
            .|          :::|.....|.|...:|..|...|::.:||...:|                  
 Worm   304 TN----------KLRSLAIPPISNLPSDLPSLYKLPKLFLTGATFMD------------------ 340

  Fly   254 VGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVISLEDDSSKVVLVF---GQ 315
                         ::||. |..|...|.:..:.|.:|.:|  .|....|.|:::|    |   |:
 Worm   341 -------------VSKSK-GKQVITKASKWIKSGKNLVYE--TSGCSELFDETTK----FNTDGK 385

  Fly   316 MNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV------G 374
            :.|.            |..||    ..:|.......|:.......|.|..:..|.:..      |
 Worm   386 IEEN------------TSEEY----TNKDQYRLPVPIYNIENNSDETSNFIKNIVNTTTMCIFRG 434

  Fly   375 YQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDL----SDPAPAATFSHLDATTVLSRPIAE 435
            .:...|.|..|.          .|:::..:| |...|    ..|..:||..:::....:.|    
 Worm   435 IEEAFGMDRQTF----------DISTLAPLY-PDYPLKIRRQMPQSSATNFYMNDKNTVQR---- 484

  Fly   436 LGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKTLQAYKSLQDI-----IAILG--------M 487
            ||...||...:..:::.|                 ..:.|:||:||     .|||.        |
 Worm   485 LGNAWAVFDFEGVTQLRD-----------------FAKNYESLKDIGRSAYQAILRNPSAFSEVM 532

  Fly   488 DE-----------LSEEDKLTVARARKM-----------QRFLSQPFQVAEIFTGHPGKLVPVEK 530
            |:           ||.|.||||.....:           |||..|..::.::    |..|.|   
 Worm   533 DDMKKQIKENTIPLSPEHKLTVHENATVLAFGTNIDLDDQRFKEQLDEIKKL----PDCLRP--- 590

  Fly   531 CVEGFKRLLN 540
              :|...|||
 Worm   591 --DGAGNLLN 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 93/503 (18%)
ATP-synt_ab_N 106..173 CDD:280947 11/83 (13%)
F1-ATPase_beta 175..454 CDD:238553 52/291 (18%)
ATP-synt_ab_C 462..571 CDD:278722 28/114 (25%)
jmjd-3.2NP_510405.1 COG5644 40..>191 CDD:227931
JmjC 577..641 CDD:214721 8/31 (26%)
JmjC 611..719 CDD:334913
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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