DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and Atp5f1b

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_599191.1 Gene:Atp5f1b / 171374 RGDID:621368 Length:529 Species:Rattus norvegicus


Alignment Length:465 Identity:351/465 - (75%)
Similarity:408/465 - (87%) Gaps:1/465 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 GVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQP 168
            |.|.||||.|:||.|:|.:|.:||||:||... :.|||||..|||.:.||.:|||.||||.|||.
  Rat    61 GQIVAVIGAVVDVQFDEGLPPILNALEVQGRE-SRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 124

  Fly   169 VLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKV 233
            |||:|.||::.||...||||:||:|:|||:||.:|:..::.||.||||..::||:.|||||||||
  Rat   125 VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKV 189

  Fly   234 IDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESK 298
            :||||||.|||||||||||||||||||||||||:||:|||||||.|.|||||||||||||||||.
  Rat   190 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESG 254

  Fly   299 VISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVS 363
            ||:|:|.:|||.||:||||||||||:||.|||||:||||||.:||||||||||||||||||||||
  Rat   255 VINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 319

  Fly   364 ALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTV 428
            ||||||||||||||||.|||||||||||:|:.||||||||:|||||||:|||||.||:|||||||
  Rat   320 ALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 384

  Fly   429 LSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEE 493
            |||.|||||||||||||||:|||:||::||.|||:|||.|||.||.|||||||||||||||||||
  Rat   385 LSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEE 449

  Fly   494 DKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAE 558
            |||||:||||:||||||||||||:||||.|||||:::.::||:::|.|:||.:||.||||||..|
  Rat   450 DKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGDYDHLPEQAFYMVGPIE 514

  Fly   559 EVLAKATQLA 568
            |.:|||.:||
  Rat   515 EAVAKADKLA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 351/465 (75%)
Atp5f1bNP_599191.1 AtpD 56..526 CDD:439825 351/465 (75%)

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