DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbetaL and KDM5B

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001300971.1 Gene:KDM5B / 10765 HGNCID:18039 Length:1580 Species:Homo sapiens


Alignment Length:776 Identity:139/776 - (17%)
Similarity:224/776 - (28%) Gaps:308/776 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WAKMATACARIGLKMGPGTGGY-RGNY--LGNP-------------------------------- 34
            |.|:||   ::|...|...|.: ||:|  :.||                                
Human   152 WTKIAT---KMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDI 213

  Fly    35 ----------------------------VVFPR-------YLHASLSLWDDKDKKKSGDEC---- 60
                                        .|.||       ..|.:|.|.|..:...|..:.    
Human   214 PQRQSVQPSETCPPARRAKRMRAERQSLAVLPRLECSGAILAHCNLRLLDSSNSSASASQAMNIK 278

  Fly    61 -EPEPQEVCKTDAELVKKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAVIGPVIDVYFEEEVP- 123
             |||.....:|. .|.::......:||.:|......|.|...||..|         |..|:|.| 
Human   279 IEPEETTEARTH-NLRRRMGCPTPKCENEKEMKSSIKQEPIERKDYI---------VENEKEKPK 333

  Fly   124 ----EVLNALQV---------------------QDAPIANLVLEVFHHLGN---NIVRCVAMDST 160
                :..||:.:                     .|:.....::...|.:..   ...:|:|.:.:
Human   334 SRSKKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECS 398

  Fly   161 EGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSF-IHNEAPELTDLSVKP 224
                  :|....|:.      :|.....|...|:..|   ..|||:::. :|....||    |:.
Human   399 ------KPQEAFGFE------QAARDYTLRTFGEMAD---AFKSDYFNMPVHMVPTEL----VEK 444

  Fly   225 EI--LVTGIKVIDLLAPY--------------VKGGKIGL-------------FGGAGVGKTVLI 260
            |.  ||:.|:. |:...|              |:.|||.|             .....|.:..::
Human   445 EFWRLVSTIEE-DVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVL 508

  Fly   261 MELINNIA--------------------KSHGGYSV-FVGAGE-RTREG---------------- 287
            ..:..:|.                    :.|..||: ::..|| :|..|                
Human   509 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKL 573

  Fly   288 --------NDLYHEMI-----------ESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTI 333
                    .||.|:::           |..|......:.:.|:.|      |.|.......|...
Human   574 APELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITF------PRAYHSGFNQGFNF 632

  Fly   334 AE--YFRDVD----GQDVLLFIDNIFRF---------TQAGSEVSALLGRIPSAVGYQPTLGTDM 383
            ||  .|..||    |:..:.....:.|:         .:..|:...|      .|....|:..||
Human   633 AEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVL------DVVVASTVQKDM 691

  Fly   384 GTMQE-----RITSTRNGSITSVQAVY--VPADDLSDPAPAATFSHLDATTVLSRP--------I 433
            ..|.|     |.|..:.|.|.|.:..:  :| ||........|...:.|.:...:|        :
Human   692 AIMIEDEKALRETVRKLGVIDSERMDFELLP-DDERQCVKCKTTCFMSAISCSCKPGLLVCLHHV 755

  Fly   434 AEL-----------------GIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKTLQAYKSLQDI 481
            .||                 .:||.::.|.     |..:...|...||..|::..:...|||...
Human   756 KELCSCPPYKYKLRYRYTLDDLYPMMNALK-----LRAESYNEWALNVNEALEAKINKKKSLVSF 815

  Fly   482 IAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGE 542
            .|::   |.||..|.......:..|.::|                ..|||....::||||:
Human   816 KALI---EESEMKKFPDNDLLRHLRLVTQ----------------DAEKCASVAQQLLNGK 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 108/603 (18%)
KDM5BNP_001300971.1 JmjN 31..72 CDD:128818
ARID_KDM5B 94..183 CDD:350638 12/33 (36%)
PHD1_KDM5B 347..392 CDD:277076 2/44 (5%)
JmjC 522..638 CDD:396791 19/121 (16%)
zf-C5HC2 728..780 CDD:460750 6/51 (12%)
PLU-1 793..1124 CDD:462475 21/84 (25%)
PHD2_KDM5B 1214..1257 CDD:277080
PHD3_KDM5B 1522..1571 CDD:277157
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.