DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13074 and dync2i2

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001099160.1 Gene:dync2i2 / 794361 ZFINID:ZDB-GENE-070928-9 Length:501 Species:Danio rerio


Alignment Length:396 Identity:82/396 - (20%)
Similarity:140/396 - (35%) Gaps:112/396 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PSQDAATGTQEK--LHVATQTE----QRVVSSKDVEYDERALAKWLRQICPMVERELMNPTPL-- 94
            |.....|.||.|  ....|||:    |.:...:|:. |...|..::|:...:|.|||:..:..  
Zfish    33 PVHTTETETQAKDVSENGTQTQDQSGQTLSLDRDLT-DFPGLLDFMRRAEDVVIRELVKNSKSHA 96

  Fly    95 ----------MEDLTMSQCRL------EEKLQVYTYQKLIMGGAENSQGLAIWLCVHTNNAPVLV 143
                      ..:......||      |:.|||.:..               |.|..:     ::
Zfish    97 FDGFEVNWEEQNESVSCMYRLQHVDAQEKSLQVTSVS---------------WNCTGS-----VI 141

  Fly   144 ATTVAPHD--DWCE--------HVDQQLKLFVPQRMSVGNLVIYTEAKTLPLKSCLRSLCTNPFN 198
            |......|  ||..        :||:|  ...|:|..|          .:.:.:.:..||.:|..
Zfish   142 ACGFGRVDDGDWSNEKACVCTWNVDRQ--NLNPKRPDV----------IIDVATPVMCLCFHPVR 194

  Fly   199 KTMFAGSTMDGELFIWLYEQARGSD-------SSVDI--KQLYSVSSTQGAAVALDWPREHLLLA 254
            .::.||....||:.:|  :.:|..|       .|.|.  :.:|.::...||...     |..:|:
Zfish   195 PSVVAGGLYSGEVVVW--DTSRSQDLILAQTGMSADTHREPVYQINWVPGARRG-----EFSVLS 252

  Fly   255 CFANGSVRQWDL---SRQMALDWEYTL------PATVSSEPTAMVTLG----------LDDFVVG 300
            ..:.|.|..|.:   ..::.|...|.|      .:..:|:....:|:|          ||.|:||
Zfish   253 AGSGGRVLLWTIDGSEAKLLLSSGYALVRQQMPQSGAASKTRGSLTIGVTAVALSPWDLDTFLVG 317

  Fly   301 TNDGGVYRCWNTGRQTAAI----KQIKLLALRRHRFM-----VSTLLRTEMEGNLFVLSCDLSGQ 356
            :..|.|.:|..:....||:    :.:.|.|..:..|.     :.::..:....|||| |....|.
Zfish   318 SEGGLVLKCSFSSETAAAVPSDGESVILRAPMQFSFSPRGGPIHSVHFSPFHRNLFV-SVGTDGL 381

  Fly   357 AFYHDM 362
            |..|.:
Zfish   382 AHLHSV 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
dync2i2NP_001099160.1 WD40 repeat 130..180 CDD:293791 12/81 (15%)
WD40 <163..478 CDD:441893 53/245 (22%)
WD40 repeat 187..229 CDD:293791 11/43 (26%)
WD40 repeat 235..296 CDD:293791 12/65 (18%)
WD40 repeat 301..338 CDD:293791 10/36 (28%)
WD40 repeat 361..399 CDD:293791 8/28 (29%)
WD40 repeat 403..442 CDD:293791
WD40 repeat 450..477 CDD:293791
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.