DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and Dync2i2

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001008498.2 Gene:Dync2i2 / 71820 MGIID:1919070 Length:537 Species:Mus musculus


Alignment Length:442 Identity:88/442 - (19%)
Similarity:146/442 - (33%) Gaps:128/442 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AATGTQEKLHVATQT-----EQRVVSSKDVEYDERALAKWLRQICPMVERELMNPTPLMEDLTMS 101
            |.:..|.:.|...|.     |:....:...:||...|..:||::..||.|||.|           
Mouse    73 AESSAQARTHADAQVQTEAPEEPAAMAPVSQYDTLRLEAFLRRVEAMVIRELNN----------- 126

  Fly   102 QCRLEEKLQVYTYQKLIMGGAENSQGLAIWLCVHT------------------NNAPVLVATTVA 148
                  ..|.:.:....:...|..|.::   |:||                  |:...::|....
Mouse   127 ------NWQSHAFDGYEVNWTEQQQTVS---CLHTLVYPLAQGQGLHVTGISWNSTGSVLACAYG 182

  Fly   149 PHD--DWCEHVDQQLKLFV-----------PQRMSVGNLVIYTEAKTLPLKSCLRSLCTNPFNKT 200
            ..|  ||     ..||.:|           ||:.||          .:.:.|.:..|..:|...:
Mouse   183 RLDDGDW-----STLKSYVCTWNLDRQGLNPQQPSV----------VVEVPSAVMCLAFHPTQPS 232

  Fly   201 MFAGSTMDGELFIW---------LYEQARGSDSSVDIKQLYSVSSTQGAAVALDWPR---EHLLL 253
            ..||....||:.:|         |:......|:..|  .:|.|       :.|..||   ...:|
Mouse   233 HIAGGLYSGEVLVWDMSRPEDPLLWRTGLTDDTHTD--PVYQV-------LWLPEPRHSHRFQVL 288

  Fly   254 ACFANGSVRQW--------DLSRQMALDWEYTLPATVSSEP---------TAMVTLGLDD--FVV 299
            :...:|.|..|        .|::..||..:....:|...:|         |::.....|.  ||:
Mouse   289 SAATDGKVLLWRGSGAGQLRLTKGFALAVQQLPRSTKLKKPPRGETEVGVTSVAFSSFDSSLFVL 353

  Fly   300 GTNDGGVYRCWNTGRQTAAIKQIKLLALRR--------HRFMVSTLLRTEMEGNLFVLSCDLSGQ 356
            ||..|...:|.......|..:....:.||.        |...|.::..:....||| ||....|.
Mouse   354 GTEGGFPLKCSLASEVAALTRMPSSVPLRAPVQFTFSPHGGPVYSVSCSPFHRNLF-LSAGTDGH 417

  Fly   357 AFYHDMRLVDEDMAQLIVQIPLPFKNVIAC--SRDGNIIFCPAN-DGSLEYY 405
            ...:.|.     .||.:..:.|..|.:.|.  |....::|..|: :|.::.:
Mouse   418 VHLYSML-----QAQPLTSLQLSHKYLFAVRWSPVRPLVFAAASGEGDVQLF 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
Dync2i2NP_001008498.2 WD40 50..515 CDD:441893 88/442 (20%)
DYNLL2 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 80..93 2/12 (17%)
DYNLRB1 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 107..132 10/41 (24%)
WD40 repeat 165..211 CDD:293791 10/50 (20%)
WD 1. /evidence=ECO:0000255 216..256 8/39 (21%)
WD40 repeat 223..265 CDD:293791 8/41 (20%)
WD 2. /evidence=ECO:0000255 265..309 10/52 (19%)
WD40 repeat 271..312 CDD:293791 10/47 (21%)
WD40 repeat 339..389 CDD:293791 11/49 (22%)
WD 3. /evidence=ECO:0000255 391..431 11/45 (24%)
WD40 repeat 396..433 CDD:293791 10/42 (24%)
WD 4. /evidence=ECO:0000255 434..474 7/31 (23%)
WD40 repeat 439..479 CDD:293791 5/26 (19%)
WD 5. /evidence=ECO:0000255 481..521
WD40 repeat 486..511 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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