DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and Dnai1

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001019513.1 Gene:Dnai1 / 500442 RGDID:1565671 Length:705 Species:Rattus norvegicus


Alignment Length:472 Identity:85/472 - (18%)
Similarity:153/472 - (32%) Gaps:195/472 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DPPPPSQDAATGTQEKLHVATQTE-QRVVSSKDVEYDERALAKWLRQICPMVERELMNPTPLMED 97
            :|||.:..:||..|.:::.|...| :::..:|:.|..:..:||...:   |..|:|.:.....:|
  Rat   219 EPPPRTNFSATANQWEIYDAYVDELEKLEKTKEKEKTKTPVAKKTEK---MAMRKLTSMESQSDD 280

  Fly    98 LT-MSQCR--LEEKLQVYTYQKLIMGGAENSQGLAIWLCVHTNNAPVLVATTVAPHDDWC-EHVD 158
            :| ::|..  :|..:...||..                          ||.....::|.. |:.|
  Rat   281 ITKVTQAAKIVERMVNQNTYDD--------------------------VAQDFKYYEDAADEYRD 319

  Fly   159 QQLKLFVPQRMSVGNLVIYTEAKTLPL---------KSCLRSLCTNPFNKTMFA---GSTMDGEL 211
            |                   |...|||         :..:.:||.||..|.:||   ||      
  Rat   320 Q-------------------EGTLLPLWKFQNDKAKRLAVTALCWNPKYKDLFAVGHGS------ 359

  Fly   212 FIWLYE---QARGSDSSVDIKQLYSVS---------STQGAAVALDWPREH--LLLACFANGSVR 262
                |:   |:||      :..|||:.         |::...:.||...:|  |::..:.:|:|.
  Rat   360 ----YDFMKQSRG------MLLLYSMKNPSFPEYMFSSESGIMCLDMHMDHPYLVVVGYYDGNVA 414

  Fly   263 QWDLSRQMA-------------------LDWE---------------------YTLPATVSSEPT 287
            .::|.:..:                   :.|:                     :||   |.||..
  Rat   415 IYNLKKPHSQPCFRSTSKSGKHTDPVWQVKWQKDDMDHNLNFFSVSSDGRIVSWTL---VKSELV 476

  Fly   288 AMVTLGLDD-------------------------------FVVGTNDGGVYRCWNTGRQTAAIKQ 321
            .:..:.|.|                               |:|||.:|.:|:|      :.:...
  Rat   477 HIDVIKLKDEGSTTEIPEGLQLHTVGCGTAFDFHKEIDYLFLVGTEEGKIYKC------SKSYSS 535

  Fly   322 IKLLALRRHRFMVSTLLRTEMEGNLFVLSCD-----------LSGQAFYHDMRLVDEDMAQLIVQ 375
            ..|.....|...|..:|.......:|: ||.           :....|.:|:.....|:|.    
  Rat   536 QFLDTYDAHNMAVDAVLWNPYHARVFI-SCSSDWTVKIWDHAIKTPMFIYDLNAAVGDVAW---- 595

  Fly   376 IPLPFKNVI--ACSRDG 390
              .|:.:.:  |.:.||
  Rat   596 --APYSSTVFAAVTTDG 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
Dnai1NP_001019513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..169
WD40 repeat 340..386 CDD:293791 16/61 (26%)
WD40 <358..616 CDD:475233 47/285 (16%)
WD 1 386..426 8/39 (21%)
WD40 repeat 392..433 CDD:293791 7/40 (18%)
WD 2 435..478 6/45 (13%)
WD40 repeat 440..494 CDD:293791 8/56 (14%)
WD40 repeat 505..542 CDD:293791 8/42 (19%)
WD 3 543..583 6/40 (15%)
WD40 repeat 548..587 CDD:293791 7/39 (18%)
WD 4 585..625 7/32 (22%)
WD40 repeat 590..631 CDD:293791 6/27 (22%)
WD 5 633..672
Blue background indicates that the domain is not in the aligned region.

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