DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and dync1i2

DIOPT Version :9

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_012825730.1 Gene:dync1i2 / 407935 XenbaseID:XB-GENE-960812 Length:655 Species:Xenopus tropicalis


Alignment Length:337 Identity:65/337 - (19%)
Similarity:115/337 - (34%) Gaps:105/337 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DPPPPSQDAATGTQEKLHVATQTE-QRVVSSKD-VEYDERALAKWLRQICPMVERELMNPTPLME 96
            |.|...::.   |:...|..|:.| |:::.|:: |.:.:.:..        :|||.|.....:..
 Frog   209 DKPEKKEEK---TEAPPHELTEEEKQQIIHSEEFVSFFDHSTR--------IVERALSEHVNIFF 262

  Fly    97 DLTMSQCRLEEKLQVYTYQKLIMGGAE-----------------------NSQGLAIWLCVHTNN 138
            |  .|...||||      :..|..||:                       :||...:.:..:.||
 Frog   263 D--YSGRDLEEK------EGEIQAGAKLSFNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNN 319

  Fly   139 APVLVATTVAPHDD------WCEHVDQQLKLFVPQRMSVGNLVIYTEAKTLPLKSCLRSLCTNPF 197
            ..       |||:.      |    :.:.|...|:.:             ...:|.:.|.....|
 Frog   320 ED-------APHEPDGVALVW----NMKYKKMTPEYV-------------FHCQSAVMSAAFARF 360

  Fly   198 NKTMFAGSTMDGELFIW-------LYEQARGSDSSVDIKQLYSVS--STQGAAVALDWPREHLLL 253
            :..:..|.|..|::.:|       ...|.....::.....:|.|:  .||.|         |.|:
 Frog   361 HPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNA---------HNLI 416

  Fly   254 ACFANGSVRQWDL--------SRQMALDWEYTLPATVSSEPTAMVTLGLDDFVVGTNDGGVYRCW 310
            :...:|.:..|.|        |.::.......:..|..|.|...|    ::||||:.:|.||...
 Frog   417 SISTDGKICSWSLDMLSQPQDSMELVHKQSKAVAVTCMSFPVGDV----NNFVVGSEEGSVYTAC 477

  Fly   311 NTGRQTAAIKQI 322
            ..|.: |.|.::
 Frog   478 RHGSK-AGISEM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 WD40 repeat 189..234 CDD:293791 8/51 (16%)
WD40 repeat 242..275 CDD:293791 6/40 (15%)
dync1i2XP_012825730.1 Dynein_IC2 154..182 CDD:288403
WD40 repeat 299..346 CDD:293791 10/70 (14%)
WD40 372..>616 CDD:225201 28/131 (21%)
WD40 397..>622 CDD:295369 25/106 (24%)
WD40 repeat 451..498 CDD:293791 14/43 (33%)
WD40 repeat 506..538 CDD:293791
WD40 repeat 544..582 CDD:293791
WD40 repeat 590..616 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1453532at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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