DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and mmm

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_648138.1 Gene:mmm / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster


Alignment Length:258 Identity:53/258 - (20%)
Similarity:89/258 - (34%) Gaps:57/258 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 TNPFNKTM--FAGSTMDGELFIWLYEQARGSDSSVDIKQLYSVSSTQGAAV-ALDWPREHLLLAC 255
            |||:.:..  ||..:...:.|:..|:........:.:...:|..:|...|. .:|:.:.    |.
  Fly   374 TNPYLQEFLCFANISKSNKRFVAGYDWYPKLSGLIAVSYAFSTPATVNEATNRVDYVQR----AV 434

  Fly   256 FANGSVRQWDLSRQMALDWEYTLPATVSSEPTAMVTLGLD-DFVVGTNDGGVYRCWNTGRQTAAI 319
            .....|..|..|..:....|:..|.    |.||:.....: |.::|.:..|....|:...:...:
  Fly   435 LEPNPVLLWSFSDNLNYKLEFEAPI----ETTALTFCPFNGDILLGGSKNGQVVLWDLQGRCEKL 495

  Fly   320 KQIKLL--ALRRHRFMVSTLLR--TEMEGNLFV------LSCDLSG--QAFYHDMRLV------- 365
            .:.:.|  |..::|.|:...|.  .::|.|:.|      |.|...|  .|||...|.:       
  Fly   496 DEEEYLTAAQAKYRIMIGEFLNWTIDIEDNVIVPATISLLDCSPKGAITAFYWLGRSIYLSQFGK 560

  Fly   366 ---DEDMAQLIVQIPLPFKNVIACSRDGNIIFCPANDGSLEYYRVSDGAHAHVKGGLRGKGSL 425
               |.|:..       ..|..:.|:.||.|.|...           ||     |||...|..:
  Fly   561 VYNDPDIRN-------HHKFFVTCAFDGTISFWDL-----------DG-----KGGKSAKDKM 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
mmmNP_648138.1 WD40 repeat 462..505 CDD:293791 7/42 (17%)
WD40 repeat 510..547 CDD:293791 9/36 (25%)

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