DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and Dync1i2

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:374 Identity:72/374 - (19%)
Similarity:131/374 - (35%) Gaps:111/374 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VEFP---------------ATQPLEKQHALVDNCTGTDPPPPSQ------DAATGTQEKLHVATQ 55
            |:||               ..||.|.:....|..|...|..|.:      |....::...|..|:
Mouse   163 VDFPPREIVTYTKETQTPVTAQPKEDEEEEDDVATPKPPVEPEEEKTLKKDEENDSKAPPHELTE 227

  Fly    56 TE-QRVVSSKD--------VEYDERALAKWLRQICPMVERELMNPTPLMED----------LTMS 101
            .| |:::.|::        ....||||::.:........|:|       ||          |:::
Mouse   228 EEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDL-------EDKEGEIQAGAKLSLN 285

  Fly   102 QCRLEEKLQVYTYQKLIMGGAENSQGLAIWLCVHTNNAPVLVATTVAPHDDWCEHVDQQLKLFVP 166
            :...:|:   ::..:::.....:||...:.:..:.||..       |||:              |
Mouse   286 RQFFDER---WSKHRVVSCLDWSSQYPELLVASYNNNEE-------APHE--------------P 326

  Fly   167 QRMS-VGNLVIYTEAKTLP-----LKSCLRSLCTNPFNKTMFAGSTMDGELFIW-------LYEQ 218
            ..:: |.|:   ...||.|     .:|.:.|.....|:..:..|.|..|::.:|       ...|
Mouse   327 DGVALVWNM---KYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQ 388

  Fly   219 ARGSDSSVDIKQLYSVS--STQGAAVALDWPREHLLLACFANGSVRQWDL--------SRQMALD 273
            .....::.....:|.|:  .||.|         |.|::...:|.:..|.|        |.::...
Mouse   389 RTPLSAAAHTHPVYCVNVVGTQNA---------HNLISISTDGKICSWSLDMLSHPQDSMELVHK 444

  Fly   274 WEYTLPATVSSEPTAMVTLGLDDFVVGTNDGGVYRCWNTGRQTAAIKQI 322
            ....:..|..|.|...|    ::||||:.:|.||.....|.: |.|.::
Mouse   445 QSKAVAVTSMSFPVGDV----NNFVVGSEEGSVYTACRHGSK-AGISEM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
Dync1i2NP_001185801.1 Dynein_IC2 150..180 CDD:463291 3/16 (19%)
WD40 repeat 299..348 CDD:293791 13/72 (18%)
WD40 <327..430 CDD:441893 22/114 (19%)
WD40 repeat 356..394 CDD:293791 6/37 (16%)
WD40 397..>622 CDD:475233 25/106 (24%)
WD40 repeat 402..443 CDD:293791 11/49 (22%)
WD40 repeat 451..498 CDD:293791 14/43 (33%)
WD40 repeat 506..538 CDD:293791
WD40 repeat 544..582 CDD:293791
WD40 repeat 590..616 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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