DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13074 and Dync1i2

DIOPT Version :10

Sequence 1:NP_648835.1 Gene:CG13074 / 39760 FlyBaseID:FBgn0036567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_446332.2 Gene:Dync1i2 / 116659 RGDID:620174 Length:638 Species:Rattus norvegicus


Alignment Length:374 Identity:71/374 - (18%)
Similarity:130/374 - (34%) Gaps:111/374 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VEFP---------------ATQPLEKQHALVDNCTGTDPPPPSQ------DAATGTQEKLHVATQ 55
            |:||               ..||.|.:....|......|..|.:      |....::...|..|:
  Rat   146 VDFPPREIVTYTKETQTPVTAQPKEDEEEEDDVAAPKPPVEPEEEKILKKDEENDSKAPPHELTE 210

  Fly    56 TE-QRVVSSKD--------VEYDERALAKWLRQICPMVERELMNPTPLMED----------LTMS 101
            .| |:::.|::        ....||||::.:........|:|       ||          |:::
  Rat   211 EEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDL-------EDKEGEIQAGAKLSLN 268

  Fly   102 QCRLEEKLQVYTYQKLIMGGAENSQGLAIWLCVHTNNAPVLVATTVAPHDDWCEHVDQQLKLFVP 166
            :...:|:   ::..:::.....:||...:.:..:.||..       |||:              |
  Rat   269 RQFFDER---WSKHRVVSCLDWSSQYPELLVASYNNNEE-------APHE--------------P 309

  Fly   167 QRMS-VGNLVIYTEAKTLP-----LKSCLRSLCTNPFNKTMFAGSTMDGELFIW-------LYEQ 218
            ..:: |.|:   ...||.|     .:|.:.|.....|:..:..|.|..|::.:|       ...|
  Rat   310 DGVALVWNM---KYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQ 371

  Fly   219 ARGSDSSVDIKQLYSVS--STQGAAVALDWPREHLLLACFANGSVRQWDL--------SRQMALD 273
            .....::.....:|.|:  .||.|         |.|::...:|.:..|.|        |.::...
  Rat   372 RTPLSAAAHTHPVYCVNVVGTQNA---------HNLISISTDGKICSWSLDMLSHPQDSMELVHK 427

  Fly   274 WEYTLPATVSSEPTAMVTLGLDDFVVGTNDGGVYRCWNTGRQTAAIKQI 322
            ....:..|..|.|...|    ::||||:.:|.||.....|.: |.|.::
  Rat   428 QSKAVAVTSMSFPVGDV----NNFVVGSEEGSVYTACRHGSK-AGISEM 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13074NP_648835.1 None
Dync1i2NP_446332.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..135
Interaction with DYNLT1. /evidence=ECO:0000269|PubMed:27502274 133..165 3/18 (17%)
Dynein_IC2 133..163 CDD:463291 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..209 8/54 (15%)
WD 1 277..326 12/72 (17%)
WD40 repeat 282..331 CDD:293791 13/72 (18%)
WD40 <310..413 CDD:441893 22/114 (19%)
WD 2 330..370 7/39 (18%)
WD40 repeat 339..377 CDD:293791 6/37 (16%)
WD 3 379..420 10/49 (20%)
WD40 380..>605 CDD:475233 25/106 (24%)
WD40 repeat 385..426 CDD:293791 11/49 (22%)
WD 4 429..469 13/44 (30%)
WD40 repeat 434..481 CDD:293791 14/43 (33%)
WD 5 474..519
WD40 repeat 489..521 CDD:293791
WD40 repeat 527..565 CDD:293791
WD 6 568..607
WD40 repeat 573..599 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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