DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5235 and dbh

DIOPT Version :9

Sequence 1:NP_001261921.1 Gene:CG5235 / 39758 FlyBaseID:FBgn0036565 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001103164.1 Gene:dbh / 30505 ZFINID:ZDB-GENE-990621-3 Length:614 Species:Danio rerio


Alignment Length:593 Identity:171/593 - (28%)
Similarity:279/593 - (47%) Gaps:75/593 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 MDSLGLYWLKWWINANENSIYFEVTVHT--RGFAGLGFSKDGRLARADMVLMWVDDATGHPNVLD 112
            :|..|...|.|.|:..:..:..||.|..  .|.. ||.|..|....||:|::|.|   ||.:...
Zfish    49 LDPSGQLELSWNISYPKQEVLLEVKVKELHHGII-LGMSDRGEPTNADLVILWDD---GHKSYFG 109

  Fly   113 CHGALHPSSGPPLQDDTQNYDVLDGKQNGTHTILKFKRKIETCDPFDIPLSADTFKVLWSIGEND 177
              .|...|.|....|..|:|.:|:..|:.....|.|||...||||.|..:...|..:::::.|: 
Zfish   110 --DAWSDSEGRVTLDTQQDYQLLETHQSTEGFFLLFKRSFSTCDPHDYIIEEGTVHIIYTMLEH- 171

  Fly   178 PI---HGNLDWQGQSRGVKALQLFSPMFTKNSHSIEGIQKWDITVNNVTIDRSMDTLYWCKIVRL 239
            ||   | .|:......||:.:.|..| .|.:.|..:.::..::...:|.|. :.:|.|||.|.:|
Zfish   172 PILSLH-ELNISRLQPGVQRVLLLRP-DTPSPHLPKDVRTLEVLAPDVIIP-TQETTYWCHIYQL 233

  Fly   240 PELTGKQHIIGYEPLLSGKYERNVVHHMTLFECQSKI-----YSGSDPSSWDLWVRSAGTVCNSN 299
            |....|.||:.||.:::...|. :|||:.:|||..::     ||||               |:|.
Zfish   234 PPNLPKNHIVMYESVITPGNEA-IVHHIEVFECSPQMDIVPQYSGS---------------CDSK 282

  Fly   300 LLTPRDWDSCSTPVAVWSLGSDGQFLPPHAGIPMGGASGVSYYMLEIHYDNP---DGKESVDHSG 361
             :.||:.:.|...:|.|::|::..:.|..||:||||.....:..||:||.||   .|:.  |.||
Zfish   283 -MKPRNLNYCRHVLAAWAMGAEPFYYPADAGLPMGGEGSSRFLRLEVHYHNPLLLSGRR--DSSG 344

  Fly   362 FRIHYTPNLRTYDSGILISGVSISETQLIPPGQKKYRSVGICGPSCSSVMFPKDGIKIISGTLHS 426
            .|:.|:|:||.:|:||:..|:..:....|||.|:.::..|.|...|:....|..||.|.:..||:
Zfish   345 IRLWYSPSLRRFDAGIMELGLVYTPVMAIPPRQRSFQLTGYCTAKCTQTALPVGGIHIFASQLHT 409

  Fly   427 HQAGRTISLRHVRSGKELNPIIVDENYDYRHQKVHQLANETVVLPGDYLITDCSYETKYRKRPTF 491
            |.||..:....||.|:|:..:..|:::...:|.:..|.....|||||.|:|.|.:.|:.|.:.|.
Zfish   410 HLAGLGVRTVLVRGGQEVEVVQEDKHFSTHYQIIRVLQKMVTVLPGDALLTTCRFNTEDRSKVTV 474

  Fly   492 GGYSTKEEMCLTFITYYPKIEMSGCYSMTP---VREFFEMFRVYQ---FYSLNMTDVENMFLYNS 550
            ||:...||||:.::.|||:.::..|.|...   ::::|.:...:|   ..|...|.||..| .:.
Zfish   475 GGFGIMEEMCVNYVHYYPRTQLELCKSHVDTDYLQKYFSLINRFQGRESCSCPQTSVEEQF-SSV 538

  Fly   551 DYTDYSKQAKNATNKPNSGKTSKEDVIYQESLLNKLVISDPAEFHDRTFLSHLNQLPWHD---PL 612
            .:..:|.:                       :||.|.::.|...|.....:.|....|..   |:
Zfish   539 SWDSFSGE-----------------------VLNSLYVTAPFSMHCNQSTAQLFPGDWEKQEIPV 580

  Fly   613 FTKRVEQA 620
            .|.::::|
Zfish   581 VTAQLQRA 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5235NP_001261921.1 DOMON 54..174 CDD:281361 37/121 (31%)
Cu2_monooxygen 214..354 CDD:279429 46/147 (31%)
Cu2_monoox_C 374..529 CDD:281675 50/157 (32%)
dbhNP_001103164.1 DOMON 52..168 CDD:281361 37/121 (31%)
Cu2_monooxygen 209..336 CDD:279429 46/144 (32%)
Cu2_monoox_C 357..512 CDD:281675 49/154 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3568
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472750at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.