DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5235 and Dbh

DIOPT Version :9

Sequence 1:NP_001261921.1 Gene:CG5235 / 39758 FlyBaseID:FBgn0036565 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_037290.3 Gene:Dbh / 25699 RGDID:2489 Length:621 Species:Rattus norvegicus


Alignment Length:482 Identity:150/482 - (31%)
Similarity:236/482 - (48%) Gaps:42/482 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 MDSLGLYWLKWWINANENSIYFEVTVH-TRGFAGLGFSKDGRLARADMVLMWVD-DATGHPNV-L 111
            :|..|...|.|.::.::..|:|::.|. .|.....|.|..|.:..||:|::|.| |.|...:. .
  Rat    56 LDPEGTLELSWNVSYDQEIIHFQLQVQGPRAGVLFGMSDRGEMENADLVMLWTDGDRTYFADAWS 120

  Fly   112 DCHGALHPSSGPPLQDDTQNYDVLDGKQNGTHTILKFKRKIETCDPFDIPLSADTFKVLWSIGEN 176
            |..|.:|       .|..|:|.:|..::......|.|||...||||.|..:..||..:::.|.| 
  Rat   121 DQKGQIH-------LDTHQDYQLLQAQRVSNSLSLLFKRPFVTCDPKDYVIEDDTVHLVYGILE- 177

  Fly   177 DPIHG--NLDWQGQSRGVKALQLFSPMFTKNSHSIEGIQKWDITVNNVTIDRSMDTLYWCKIVRL 239
            :|...  .::..|...|::.:||..|..:..:...: :|..||...:|.|. |.:|.|||.|..|
  Rat   178 EPFQSLEAINTSGLHTGLQQVQLLKPEVSTPAMPAD-VQTMDIRAPDVLIP-STETTYWCYITEL 240

  Fly   240 PELTGKQHIIGYEPLLSGKYERNVVHHMTLFECQSK-----IYSGSDPSSWDLWVRSAGTVCNSN 299
            |....:.|||.||.:::...|. :||||.:|:|.::     :::|.               |:|.
  Rat   241 PLHFPRHHIIMYEAIVTEGNEA-LVHHMEVFQCTNESEAFPMFNGP---------------CDSK 289

  Fly   300 LLTPRDWDSCSTPVAVWSLGSDGQFLPPHAGIPMGGASGVSYYMLEIHYDNP---DGKESVDHSG 361
             :.|...:.|...:|.|:||:...:.|..||:|.||:....:..||:||.||   .|:.  |.||
  Rat   290 -MKPDRLNYCRHVLAAWALGAKAFYYPEEAGVPFGGSGSSRFLRLEVHYHNPRNIQGRR--DSSG 351

  Fly   362 FRIHYTPNLRTYDSGILISGVSISETQLIPPGQKKYRSVGICGPSCSSVMFPKDGIKIISGTLHS 426
            .|:|||.:||..::||:..|:..:....|||.:..:...|.|...|:.:..||.||:|.:..||:
  Rat   352 IRLHYTASLRPNEAGIMELGLVYTPLMAIPPQETTFVLTGYCTDRCTQMALPKSGIRIFASQLHT 416

  Fly   427 HQAGRTISLRHVRSGKELNPIIVDENYDYRHQKVHQLANETVVLPGDYLITDCSYETKYRKRPTF 491
            |..||.:.....|.|::...:..|.:|....|::..|.|...|..||.|||.|:|.|:.|...|.
  Rat   417 HLTGRKVITVLARDGQQREVVNRDNHYSPHFQEIRMLKNAVTVHQGDVLITSCTYNTENRTMATV 481

  Fly   492 GGYSTKEEMCLTFITYYPKIEMSGCYS 518
            ||:...||||:.::.||||.|:..|.|
  Rat   482 GGFGILEEMCVNYVHYYPKTELELCKS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5235NP_001261921.1 DOMON 54..174 CDD:281361 35/122 (29%)
Cu2_monooxygen 214..354 CDD:279429 45/147 (31%)
Cu2_monoox_C 374..529 CDD:281675 50/145 (34%)
DbhNP_037290.3 DOMON 60..175 CDD:397434 35/121 (29%)
Cu2_monooxygen 217..340 CDD:395859 43/140 (31%)
Cu2_monoox_C 363..519 CDD:397669 50/146 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3568
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472750at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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