DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5235 and tbh-1

DIOPT Version :9

Sequence 1:NP_001261921.1 Gene:CG5235 / 39758 FlyBaseID:FBgn0036565 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001257264.1 Gene:tbh-1 / 181639 WormBaseID:WBGene00006541 Length:657 Species:Caenorhabditis elegans


Alignment Length:633 Identity:164/633 - (25%)
Similarity:263/633 - (41%) Gaps:139/633 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LKW-------------WINANENSIYFEVTVHTRGFAGLGFSKDGRLARADMVLMWVDDATGHPN 109
            :||             |..|:...:.|           ||||..|....:| |||:.:   ....
 Worm   107 VKWHTDYERQLVDFSIWFGASTPDVLF-----------LGFSDFGDTNNSD-VLMYYN---SKKE 156

  Fly   110 VLDCHGALHPSSGPPLQDDTQNYDVLDGKQNGTHTILKFKRKIETCDPFDIPLSADT--FKVLWS 172
            :.|.:..........||.|.|..     ::...|.::  :||:.|||..|......|  |.:..|
 Worm   157 IKDAYTNRDFKITSDLQQDFQLL-----RKRKDHIVV--RRKLTTCDSRDYAFLPGTTQFYIAAS 214

  Fly   173 IGEND-----------------PIHGNLDWQGQSRGVKALQLFSPMFTKNSHSIEGIQKWDITVN 220
            .|..:                 .|.|..|.........||:....:...||:|.:.|.       
 Worm   215 W
GSTNLVDIRDKRWVVDKKFGKVIEGPTDQPNIEEEPAALEKDVKVVIVNSNSPDPIP------- 272

  Fly   221 NVTIDRSMDTLYWCKIVRLP--ELTGKQHIIGYEPLLSGKYERNVVHHMTLFECQSKI--YSGSD 281
                  :::|.|.|.|.::|  .:....|::..||.::...| ::||||.:|.|:.::  :||| 
 Worm   273 ------NVETTYKCIIRKMPFDTVNNMYHVVRMEPYVTPGNE-HLVHHMEIFMCRDEVEEWSGS- 329

  Fly   282 PSSWDLWVRSAGTVCNSNLLTPRDWDSCSTPVAVWSLGSDGQFLPPHAGIPMGGASGVSYYMLEI 346
                          ||.....|:. .|||..:|.|::|......|..||:|:||....:|.|:||
 Worm   330 --------------CNDPKKPPKS-KSCSHVIAAWAMGEGPIHYPKEAGLPIGGKGKNAYVMVEI 379

  Fly   347 HYDNPD-GKESVDHSGFRIHYTPNLRTYDSGILISGVSISETQLIPPGQKKYRSVGICGPSCSSV 410
            ||:||: .|..:|.|||:...|..||.||:||:..|:..|:...:||.||.:...|.|...|:..
 Worm   380 HYNNPELH
KGVIDSSGFQFFVTGQLRKYDAGIMELGLIYSDANSVPPNQKAWAMNGYCPSQCTKN 444

  Fly   411 MFPKDGIKIISGTLHSHQAGRTISLRHVRSGKELNPIIVDENYDYRHQKVHQLANETVVLPGDYL 475
            : |::||.|.:..||:|..||.:.....|||..:..:..||:|....|.:.||.....|:|||.|
 Worm   445 L-PEEGINIFASQLHAHLTGRKLFTSQYRSGVRIGDVNRDEHYSPHWQHLQQLRPVVKVMPGDTL 508

  Fly   476 ITDCSYETKYRKRPTFGGYSTKEEMCLTFITYYPKIEMSGC---YSMTPVREFF--------EMF 529
            :|.|.|:|:.|.:.|||||...:|||:.:|.|||..::..|   .|.:.:|.:|        :..
 Worm   509 VTTCVYDTRKRSKVTFGGYRIVDEMCVNYIYYYPASDVEVCKSAISNSTLRAYFSERHGMDGKRM 573

  Fly   530 RVYQFYSLNMTDVENMFLYNSDYTDYSKQAKNATNKPNSGKTSKEDVIYQESLLNKLVIS-DPAE 593
            ::...|| |:.|..|         ...::..|..|..|..             :|.|..: :|.|
 Worm   574 QISDMYS-NVKDWGN---------GVDEEFYNVLNVGNMN-------------MNCLKSNGEPFE 615

  Fly   594 FHDRTFLSHLNQLPWHDPLFTKRVEQAFITGTHMTFCRVSKDSLSIPS 641
            |..:.     ::..|.:     .....|::|:.:|    ::|....|:
 Worm   616 FESKD-----SRQSWEN-----MARPTFVSGSFIT----TRDRFQCPA 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5235NP_001261921.1 DOMON 54..174 CDD:281361 29/130 (22%)
Cu2_monooxygen 214..354 CDD:279429 41/144 (28%)
Cu2_monoox_C 374..529 CDD:281675 56/165 (34%)
tbh-1NP_001257264.1 DOMON 102..215 CDD:281361 28/129 (22%)
Cu2_monooxygen 270..387 CDD:279429 42/146 (29%)
Cu2_monoox_C 408..562 CDD:281675 55/154 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4822
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472750at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.870

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