DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5235 and dbh

DIOPT Version :9

Sequence 1:NP_001261921.1 Gene:CG5235 / 39758 FlyBaseID:FBgn0036565 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_002942324.3 Gene:dbh / 100492247 XenbaseID:XB-GENE-959495 Length:615 Species:Xenopus tropicalis


Alignment Length:642 Identity:180/642 - (28%)
Similarity:287/642 - (44%) Gaps:129/642 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 MDSLGLYWLKWWINANENSIYFEVTVHTRGFAGL--GFSKDGRLARADMVLMWVD-------DAT 105
            :|..|...|.|.::.:|..:||.:.:....| ||  |.|..|....|||.::|.:       ||.
 Frog    53 LDPQGSLQLYWNVSYSEKVVYFRILIKDLKF-GLIFGMSDRGDFEDADMAVLWTNELGSFFGDAW 116

  Fly   106 GHPNVLDCHGALHPSSGPPLQDDTQNYDVLDGKQNGTHTILKFKRKIETCDPFDIPLSADTFKVL 170
            .     |..|.||       .|..|:|::|:.:|:.....|.|:|...||||.|..:...|..::
 Frog   117 S-----DQKGQLH-------MDSQQDYELLNAQQSQEGLYLLFRRPFATCDPKDYLIEDGTVHLI 169

  Fly   171 WSIGENDPIH--GNLDWQG-QSRGVKALQLFSPMFTKNSHSIEGIQKWDITVNNVTID------- 225
            :::.|. |..  .::|... ::||::.:||..|               |:.:..:..|       
 Frog   170 YALLEK-PFSTLSSIDVSAIKNRGLQRVQLLKP---------------DLPIPRLPADVLNMEVR 218

  Fly   226 ------RSMDTLYWCKIVRLPELTGKQHIIGYEPLLSGKYERNVVHHMTLFECQSKIYSGSDPSS 284
                  .:.:|.|||.|..||:...|.||:.|||:::..:|. :|||:.:|:|.|..|:      
 Frog   219 APQVLIPAKETTYWCHITELPKDFTKHHIVMYEPVITKGHEA-IVHHIEVFQCASNYYT------ 276

  Fly   285 WDLWVRSAGTVCNSNLLTPRDWDSCSTPVAVWSLGSDGQFLPPHAGIPMGGASGVSYYMLEIHYD 349
                :......|:|. :.|:..:||...:|.|::|:...:.|..:|:..||.....|..||:||.
 Frog   277 ----IPRYDGPCDSK-MKPQSLNSCRHVLAAWAMGAKAFYYPEESGLAFGGPDSSRYLRLEVHYH 336

  Fly   350 NP-DGKESVDHSGFRIHYTPNLRTYDSGILISGVSISETQLIPPGQKKYRSVGICGPSCSSVMFP 413
            || :.|...|.||.|::||..||.||:||:..|:..|....||||||.:...|.|...|:....|
 Frog   337 NPLELKGLRDSSGIRLYYTSTLRRYDAGIMEVGLVYSPVMAIPPGQKDFLLTGYCTDKCTDRALP 401

  Fly   414 KDGIKIISGTLHSHQAGRTISLRHVRSGKELNPIIVDENYDYRHQKVHQLANETVVLPGDYLITD 478
            .:||:|.:..||:|.|||.:|...||.|||...:..|.:|....|::..|.....|||||.::|.
 Frog   402 SNGIRIFASQLHTHLAGRGVSTILVREGKEAEVVNADGHYSPHFQEIRMLKKAVHVLPGDVMVTS 466

  Fly   479 CSYETKYRKRPTFGGYSTKEEMCLTFITYYPKIEMSGCYSMTP---VREFFEMFRVYQFYSLNMT 540
            |||.|:.||..|.||:|..:|||:.::.|||:.::..|.||..   ::::|.|.           
 Frog   467 CSYNTEDRKNITVGGFSITDEMCVNYVHYYPRTDLELCKSMVDPGYLQKYFHMV----------- 520

  Fly   541 DVENMFLYNSDYTDYSKQAKNATNKPNSGKTSKEDVIYQESLLNKLVISDPAEFHDRTFLSHLNQ 605
               |.|  |||         :.:..||:..|.:    :||                         
 Frog   521 ---NRF--NSD---------DVSTSPNTTVTKQ----FQE------------------------- 542

  Fly   606 LPWHDPLFTKRVEQAFITGTHMTFCRVSKDSLSIPSEIIRYPEFTAYVK---PPAAC 659
            :||:.  |:..|.::..:...::.......::..|.|..:.|......|   |||.|
 Frog   543 VPWNS--FSAGVLKSLYSFAPISMHCNRSSAVRFPGEWEKQPLPQINEKLPSPPATC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5235NP_001261921.1 DOMON 54..174 CDD:281361 36/128 (28%)
Cu2_monooxygen 214..354 CDD:279429 42/153 (27%)
Cu2_monoox_C 374..529 CDD:281675 60/157 (38%)
dbhXP_002942324.3 DOMON 57..171 CDD:397434 36/126 (29%)
Cu2_monooxygen 215..342 CDD:395859 40/138 (29%)
Cu2_monoox_C 361..517 CDD:397669 60/155 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472750at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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