DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mib1 and XBAT32

DIOPT Version :9

Sequence 1:NP_648826.2 Gene:mib1 / 39750 FlyBaseID:FBgn0263601 Length:1226 Species:Drosophila melanogaster
Sequence 2:NP_200582.3 Gene:XBAT32 / 835882 AraportID:AT5G57740 Length:508 Species:Arabidopsis thaliana


Alignment Length:523 Identity:121/523 - (23%)
Similarity:174/523 - (33%) Gaps:193/523 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 GDRAVHHAAFGDEAAVIEILAKAGADLNARNKR------RQTSLHIAVNKGHLNVVKTLLTLGCH 659
            |:|.|..|..||...     |||..|.|.|..|      |.:.||.:..:||..:|..|:..|..
plant    17 GERLVSAARDGDLQE-----AKALLDYNPRLARYSTFGVRNSPLHYSAAQGHHEIVSLLVESGVD 76

  Fly   660 PSLQDSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNN-NGFNALHHAALKGNPSAMKILLTK- 722
            .:|::..|.|.|..|....|.|::.:|:.|||:|..::. ||..|||.|||.|:|..::|||:: 
plant    77 INLRNYRGQTALMQACQHGHWEVVLILILFGANIHRSDYLNGGTALHLAALNGHPRCIRILLSEY 141

  Fly   723 ---TNRPW-IVEEKK-------------------DDGYTALHLAALNNHVEIAELLVHMGKANM- 763
               ....| :::.||                   |.|.|.||:||||.|:|..:||:.:|.:.. 
plant   142 IPSVPNCWSLLKNKKTSVAGFDSSVLHEVINRAADGGITPLHVAALNGHIETVQLLLDLGASVTQ 206

  Fly   764 ----DRQNVNL----QTALHLAVERQHVQIVKLLVQDGADLNIPDKDGDTPLHEALRHHTLSQLK 820
                |...::|    .||||.|....:.|..:||:..||.|...:.:|.||:..|...|.    .
plant   207 VTVEDGTTIDLIGAGSTALHYASCGGNTQCCQLLISKGACLAAVNSNGWTPMMVARSWHR----N 267

  Fly   821 QLQDVEGFGKLLMGLRNANNKKASASIACFLAANGADLTLKNRKQQTPLDLCPDPNLCKTLVKCY 885
            .|:::                                |.....:.|..|...|.|.||       
plant   268 WLEEI--------------------------------LNPTTEQPQLHLPNVPSPFLC------- 293

  Fly   886 NERKTDDSELPGNVAGTSSSARARAASGSLNQSSSVNMPLSSLAASSTFPAASSSSIFALNGIAN 950
                                                 :||.|:.                 .||.
plant   294 -------------------------------------LPLMSIV-----------------NIAQ 304

  Fly   951 EMSQSLHE--DPPKSSASLDECLVCSDAKRDTVFKPCGHVSCCETCA-----------------P 996
            |.....::  .|.:     |.|.||.:.|.......|.| ..|..||                 |
plant   305 ECGWRENDCLTPCR-----DPCAVCLERKCTVAADGCAH-EFCTNCALYLSTTSITSSKTSNVTP 363

  Fly   997 RVKKCLICRETVSSREKIDECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCRTQIDEILSF 1061
            ....|.:||..:.|..|:                        .|.:|..:.....||.|.  |||
plant   364 GSVPCPLCRNGIVSFTKL------------------------PHTTATTRTSTSSRTSIS--LSF 402

  Fly  1062 SLC 1064
            ..|
plant   403 CTC 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib1NP_648826.2 MIB_HERC2 109..165 CDD:284184
ZZ_Mind_bomb 177..221 CDD:239079
MIB_HERC2 248..312 CDD:284184
Ank_4 568..620 CDD:290365 6/18 (33%)
ANK repeat 568..598 CDD:293786
ANK repeat 600..631 CDD:293786 11/29 (38%)
Ank_2 606..697 CDD:289560 30/96 (31%)
ANK 628..756 CDD:238125 51/158 (32%)
ANK repeat 633..664 CDD:293786 10/36 (28%)
ANK repeat 666..695 CDD:293786 11/28 (39%)
ANK repeat 699..733 CDD:293786 14/38 (37%)
Ank_2 704..800 CDD:289560 40/128 (31%)
ANK 734..872 CDD:238125 36/146 (25%)
ANK repeat 735..767 CDD:293786 14/36 (39%)
ANK repeat 769..800 CDD:293786 12/34 (35%)
Ank_2 774..862 CDD:289560 16/87 (18%)
ANK repeat 802..862 CDD:293786 7/59 (12%)
zf-C3HC4_3 968..1011 CDD:290631 14/59 (24%)
zf-C3HC4_3 1013..1058 CDD:290631 6/44 (14%)
zf-C3HC4_3 1179..1222 CDD:290631
XBAT32NP_200582.3 ANK 52..198 CDD:238125 47/145 (32%)
ANK repeat 52..81 CDD:293786 8/28 (29%)
Ank_2 55..142 CDD:289560 32/86 (37%)
ANK repeat 83..114 CDD:293786 11/30 (37%)
Ank_2 122..251 CDD:289560 40/128 (31%)
ANK repeat 177..205 CDD:293786 13/27 (48%)
ANK repeat 210..251 CDD:293786 13/40 (33%)
ANK 221..245 CDD:197603 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I2180
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.