DRSC/TRiP Functional Genomics Resources

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Protein Alignment mib1 and mib2

DIOPT Version :9

Sequence 1:NP_648826.2 Gene:mib1 / 39750 FlyBaseID:FBgn0263601 Length:1226 Species:Drosophila melanogaster
Sequence 2:NP_001260554.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster


Alignment Length:1188 Identity:395/1188 - (33%)
Similarity:571/1188 - (48%) Gaps:216/1188 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 GARVIRGPDWKWNKQDGGEGHVGTV------RNFESAEEVVVV-WDNGTAANYRCA--GAYDLRI 164
            |.||:|||:|.|:.||.||||||||      .:..|.|..||| ||:|...|||..  ..|||.|
  Fly     8 GIRVVRGPNWIWSNQDDGEGHVGTVCEIGRCGSTHSPENTVVVNWDSGHRTNYRVGYQNQYDLII 72

  Fly   165 LDSAPTGVKHEGTMCDTCRQQPIFGIRWKCAECINYDLCSICYHGDKHHLRHRFYRITTPGGERT 229
            :|:|..||:|...:||.|.:..|.||.:|||:|.||.||:.||..|.|.:.|.|.|.|||.....
  Fly    73 VDNAQVGVRHSNVVCDGCSKAGIAGIVFKCAQCPNYHLCAYCYAEDLHDIEHPFIRYTTPNSLGV 137

  Fly   230 MLEPRRKSKKVLARGIFPGARVVRGVDWQWEDQDGGVGRRGKVNEIQDWSSASPRSAAYVIWDNG 294
            .|..|:.:|::..||||.|::||||.||:|.:||||.||.|:|.||:.|.:.|.||.|.|.|..|
  Fly   138 RLPMRKGAKRIQLRGIFVGSKVVRGPDWEWNEQDGGEGRTGRVMEIRGWDNESCRSVANVAWVTG 202

  Fly   295 SKNLYRVGFEGMADLKVVNDAKGSNVYRDHLPLLGEN------GPGKGPHGFQIGDKVTVDLDLE 353
            |.|:||:|.:|..|||.:....|.:.|:||:|:||:.      .|...| .|.:||:|.|.|:::
  Fly   203 STNVYRLGHKGNVDLKYITATCGGHYYKDHMPVLGQTEELQPVAPMVKP-SFSVGDRVKVCLEVD 266

  Fly   354 IVQSLQHGHGGWTDGMFECLSNAGMVVGIDEDHDIVVAY-NSGNRWTFNPAVLTKVSSPTTAPPE 417
            .:..||.|||||...|.|.||..|.|..|.:..||.|.| |..|||||:||.|.||.|       
  Fly   267 ALMKLQQGHGGWNPRMVEHLSKLGTVHRITDKGDIRVQYENCPNRWTFHPAALVKVVS------- 324

  Fly   418 FQVGDIVKICSDVESIKILQRGHGEWADAMQLTLGKIGRVQQVYHDNDLKVEV--GNTSWTYNPL 480
            |:|||:|.|.:|...::.||:|||||.:.|:..||||.:|.:||.|.||:::.  ....||.||.
  Fly   325 FRVGDLVTIINDANKVQQLQKGHGEWIEIMRHALGKICKVVKVYSDGDLRIQQLDDGFEWTLNPK 389

  Fly   481 AVCKVASS---TASDGSCAPVIPSSERLSAILKKLFEPNVSGDA-TEEFVKAAANGFAARCEEYL 541
            .| |:..|   ||::.|.:.:..|..|...::..|  ..:||.: .::.|:.||.|......:||
  Fly   390 CV-KLERSPLATAAERSNSMMDLSHRRADHVMTPL--SGLSGSSVADKLVREAAQGHLDFVRQYL 451

  Fly   542 AGAAQPSTSSASPSSGPDVN---VNGVFAGHTALQAASQNGHIEVIQVLLRHAVDVEIEDKDGDR 603
                             |||   |:.:..|...:|.||..|:::::..|:....:|...||:||.
  Fly   452 -----------------DVNPSQVDVMSGGKACIQVASHQGYVDLVSYLISKGANVNAVDKEGDS 499

  Fly   604 AVHHAAFGDEAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQDSEGD 668
            |:|:||||::.|.:.:|.:.||::|..|....::|||..:|...:.|:.||....:.::|||.||
  Fly   500 ALHYAAFGNQPATMRVLLQHGAEVNFLNSSHCSALHICAHKKTPHCVRELLQHNANVNIQDSYGD 564

  Fly   669 TPLHDAISKEHDEMLSLLLDF-GADITLNNNNGFNALHHAALKGN-PSAMKILLTKTNRPWIVEE 731
            |.|||||.||:.|::.||.:. ..|.|:.||.|||.||||||||| .:|.:|||....   :|..
  Fly   565 TALHDAIGKENTEVVELLCNAPNLDFTVKNNRGFNVLHHAALKGNVVAARRILLLSRQ---LVNV 626

  Fly   732 KKDDGYTALHLAALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLLVQDGADL 796
            :||||:.||||||||.|.::.|.||..|:|.:|.:|...||...|||.:.|..:::.||:...|:
  Fly   627 RKDDGFAALHLAALNGHAQVVETLVTEGQAELDIRNNRQQTPFLLAVSQGHAGVIERLVRLSCDV 691

  Fly   797 NIPDKDGDTPLHE-ALRHHTLSQLKQLQDVEG--FGKLLMGLRNAN---NKKASASIACFLAANG 855
            |..|:|||..:|. .::...|....:.|..|.  ..|..:.|.:::   ..:...||..:|:..|
  Fly   692 NAKDEDGDNAMHLCVIKKSNLQSAAEPQPEEAPEIHKFYLSLVHSSIRPEDRLMYSILIYLSRAG 756

  Fly   856 ADLTLKNRKQQTPLDLCPDPNLCKTLVKCYNERKTDDSELP----------GNVAGTSSSARARA 910
            ..:.|.|..... .:...|.::.:.:.....|.::    ||          |:..|..|||.|.|
  Fly   757 CRVELNNANASI-FEWITDRHIRQLIFGQQGEAES----LPRNLQALEVSAGSADGEESSASAGA 816

  Fly   911 ASGSLNQSSSV-----------------NMPLSSLAASSTFPAASSSSIFALNGIANEMSQSLH- 957
            .|......|..                 ::|...:.||.:.|:| |..:..||..|...:.|.. 
  Fly   817 ESNGAGPGSVAAPPPPQRQTFELMPKPNDIPAIGVGASPSTPSA-SPGVKKLNSDATPQNVSPQV 880

  Fly   958 ------EDPPKSSASLDECLVCSDAKRDT--VFKPCGHVSCCETCAPRVKKCLICRETVSSREKI 1014
                  ..||.:::|....|....|...|  |..|..|                           
  Fly   881 APRKKAPKPPVTTSSSSTALEAGAAGPSTSPVIVPGPH--------------------------- 918

  Fly  1015 DECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCRTQIDEILSFSLCCGGSGRPEKVSVAAG 1079
             ||:||::....|.|.||.|.:|||.|...||||:.|...|:..|:                   
  Fly   919 -ECIVCNEILPMVRFEPCQHQIACEECGIRMKKCLRCAVAIERRLT------------------- 963

  Fly  1080 AMATVGLPLPDDRFMEAAAAAACANASGHSVAMNNTVVTPVAGSSNQLNSQNNLLAAAAASSNVS 1144
                                     .||..||:      |.:.||                    
  Fly   964 -------------------------VSGRVVAL------PTSTSS-------------------- 977

  Fly  1145 NLSAAGNAMVAPSNVNNFQMDDVQK-LKQQLQDIKEQTMCPVCFDRIKNMVFLCGHGTCQMCGDQ 1208
                       ||:.......|:.: |:.::.:.:|...|.:|.:|.:::.||||||.|..|.:.
  Fly   978 -----------PSDPTRLPSGDLLRYLENKVLEFEESHFCGICMERKRDVAFLCGHGACSHCAET 1031

  Fly  1209 IEGCPICRKTVEKRILLF 1226
            :..|.:||||:.|:|.|:
  Fly  1032 LRTCHMCRKTILKKINLY 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib1NP_648826.2 MIB_HERC2 109..165 CDD:284184 32/64 (50%)
ZZ_Mind_bomb 177..221 CDD:239079 20/43 (47%)
MIB_HERC2 248..312 CDD:284184 35/63 (56%)
Ank_4 568..620 CDD:290365 18/51 (35%)
ANK repeat 568..598 CDD:293786 7/29 (24%)
ANK repeat 600..631 CDD:293786 13/30 (43%)
Ank_2 606..697 CDD:289560 36/91 (40%)
ANK 628..756 CDD:238125 60/129 (47%)
ANK repeat 633..664 CDD:293786 7/30 (23%)
ANK repeat 666..695 CDD:293786 14/29 (48%)
ANK repeat 699..733 CDD:293786 17/34 (50%)
Ank_2 704..800 CDD:289560 44/96 (46%)
ANK 734..872 CDD:238125 45/143 (31%)
ANK repeat 735..767 CDD:293786 17/31 (55%)
ANK repeat 769..800 CDD:293786 10/30 (33%)
Ank_2 774..862 CDD:289560 23/93 (25%)
ANK repeat 802..862 CDD:293786 14/65 (22%)
zf-C3HC4_3 968..1011 CDD:290631 6/44 (14%)
zf-C3HC4_3 1013..1058 CDD:290631 19/44 (43%)
zf-C3HC4_3 1179..1222 CDD:290631 17/42 (40%)
mib2NP_001260554.1 MIB_HERC2 8..73 CDD:284184 32/64 (50%)
ZZ_Mind_bomb 85..129 CDD:239079 20/43 (47%)
MIB_HERC2 156..220 CDD:284184 35/63 (56%)
ANK 464..582 CDD:238125 44/117 (38%)
ANK repeat 464..494 CDD:293786 7/29 (24%)
Ank_2 468..560 CDD:289560 29/91 (32%)
ANK repeat 496..527 CDD:293786 13/30 (43%)
ANK repeat 529..560 CDD:293786 7/30 (23%)
Ank_5 549..604 CDD:290568 27/54 (50%)
ANK 557..685 CDD:238125 63/130 (48%)
ANK repeat 596..628 CDD:293786 17/34 (50%)
Ank_2 601..695 CDD:289560 44/96 (46%)
ANK repeat 630..662 CDD:293786 17/31 (55%)
ANK repeat 664..695 CDD:293786 10/30 (33%)
zf-C3HC4_3 918..961 CDD:290631 20/70 (29%)
zf-C3HC4_3 1002..1044 CDD:290631 17/41 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457271
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4582
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I2180
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119594at33208
OrthoFinder 1 1.000 - - FOG0002693
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104088
Panther 1 1.100 - - P PTHR24202
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
98.800

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