DRSC/TRiP Functional Genomics Resources

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Protein Alignment mib1 and Mib1

DIOPT Version :9

Sequence 1:NP_648826.2 Gene:mib1 / 39750 FlyBaseID:FBgn0263601 Length:1226 Species:Drosophila melanogaster
Sequence 2:NP_001351926.1 Gene:Mib1 / 225164 MGIID:2443157 Length:1006 Species:Mus musculus


Alignment Length:1147 Identity:708/1147 - (61%)
Similarity:828/1147 - (72%) Gaps:170/1147 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RFSMEGVGARVIRGPDWKWNKQDGGEGHVGTVRNFESAEEVVVVWDNGTAANYRCAGAYDLRILD 166
            |..:|||||||:|||||||.|||||||||||||:|||.|||||||||||||||||:|||||||||
Mouse     8 RVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILD 72

  Fly   167 SAPTGVKHEGTMCDTCRQQPIFGIRWKCAECINYDLCSICYHGDKHHLRHRFYRITTPGGERTML 231
            |||||:||:||||||||||||.|||||||||.|||||::||||||||||||||||||||.||.:|
Mouse    73 SAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLL 137

  Fly   232 EPRRKSKKVLARGIFPGARVVRGVDWQWEDQDGGVGRRGKVNEIQDWSSASPRSAAYVIWDNGSK 296
            |.||||||:.|||||.||||||||||||||||||.||||||.||||||::||.|||||:||||:|
Mouse   138 ESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAK 202

  Fly   297 NLYRVGFEGMADLKVVNDAKGSNVYRDHLPLLGENGPGKGPHGFQIGDKVTVDLDLEIVQSLQHG 361
            ||||||||||:|||.|.||||.:.||||.|:|||....:.|.|.||||.|.:|||||||||||||
Mouse   203 NLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHG 267

  Fly   362 HGGWTDGMFECLSNAGMVVGIDEDHDIVVAYNSGNRWTFNPAVLTK---VSSPTTA------PPE 417
            ||||||||||.|:..|.|.||||||||||.|.||||||||||||||   |.|...|      ..:
Mouse   268 HGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDAAQGAEGGTSQ 332

  Fly   418 FQVGDIVKICSDVESIKILQRGHGEWADAMQLTLGKIGRVQQVYHDNDLKVEVGNTSWTYNPLAV 482
            |||||:|::|.|:|.||:|||||||||:||..||||:|||||:|.|:||||||..|||||||.||
Mouse   333 FQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAV 397

  Fly   483 CKVASSTASDGSCAPVIPSSERLSAILKKLFEPNVSGDATEEFVKAAANGFAARCEEYLAGAAQP 547
            .|||.:.::..:.     |.||||.:||||||...|||..||.|||||||..|:.|:.|      
Mouse   398 SKVAPAGSAISNA-----SGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLL------ 451

  Fly   548 STSSASPSSGPDVNVNGVFAGHTALQAASQNGHIEVIQVLLRHAVDVEIEDKDGDRAVHHAAFGD 612
                    ..|||:|||..|||||:||||||||::::::||:..||||.||||||||||||||||
Mouse   452 --------KRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGD 508

  Fly   613 EAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQDSEGDTPLHDAISK 677
            |.||||:|.:..||||||||||||.||||||||||.||||||..|||||||||||||||||||||
Mouse   509 EGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISK 573

  Fly   678 EHDEMLSLLLDFGADITLNNNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHL 742
            :.|::|::||:.|||:|:.|||||||||||||:||||||::||:|..|||||:||||||||||||
Mouse   574 KRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHL 638

  Fly   743 AALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLLVQDGADLNIPDKDGDTPL 807
            ||||||||:||||||.|.||:|.||||.||||||||||||.|||:|||:.||.|:|.||||||||
Mouse   639 AALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPL 703

  Fly   808 HEALRHHTLSQLKQLQDVEGFGK-----------LLMGL-RNANNKKASASIACFLAANGADLTL 860
            ||||||||||||:||||::..||           |:||| .....||::||||||||||||||::
Mouse   704 HEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSI 768

  Fly   861 KNRKQQTPLDLCPDPNLCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASGSLNQSSSVNMPL 925
            :|:|.|:||||||||:|||.|.||:.|:      :.|.|...|.|.                   
Mouse   769 RNKKGQSPLDLCPDPSLCKALAKCHKEK------VSGQVGSRSPSM------------------- 808

  Fly   926 SSLAASSTFPAASSSSIFALNGIANEMSQSLHEDPPKSSASLDECLVCSDAKRDTVFKPCGHVSC 990
                                  |:|:            |.:|:||:||||.||||:|.||||::.
Mouse   809 ----------------------ISND------------SETLEECMVCSDMKRDTLFGPCGHIAT 839

  Fly   991 CETCAPRVKKCLICRETVSSREKIDECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCRTQI 1055
            |..|:|||||||||:|.|.||.||:||:||||::|||.|:|||||.|||:|::||||||.||..:
Mouse   840 CSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAVV 904

  Fly  1056 DEILSFSLCCGGSGRPEKVSVAAGAMATVGLPLPDDRFMEAAAAAACANASGHSVAMNNTVVTPV 1120
            :..:.|..||||.                                                    
Mouse   905 ERRVPFITCCGGK---------------------------------------------------- 917

  Fly  1121 AGSSNQLNSQNNLLAAAAASSNVSNLSAAGNAMVAPSNVNNFQMD-DVQKLKQQLQDIKEQTMCP 1184
                              :|.:.|:..::||..|...:.:|..:: |||||:|||||||||||||
Mouse   918 ------------------SSEDPSDEISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCP 964

  Fly  1185 VCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVEKRILLF 1226
            ||.||:|||:|||||||||:|||::..||||||.:|:||||:
Mouse   965 VCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib1NP_648826.2 MIB_HERC2 109..165 CDD:284184 50/55 (91%)
ZZ_Mind_bomb 177..221 CDD:239079 39/43 (91%)
MIB_HERC2 248..312 CDD:284184 55/63 (87%)
Ank_4 568..620 CDD:290365 39/51 (76%)
ANK repeat 568..598 CDD:293786 18/29 (62%)
ANK repeat 600..631 CDD:293786 24/30 (80%)
Ank_2 606..697 CDD:289560 70/90 (78%)
ANK 628..756 CDD:238125 104/127 (82%)
ANK repeat 633..664 CDD:293786 26/30 (87%)
ANK repeat 666..695 CDD:293786 19/28 (68%)
ANK repeat 699..733 CDD:293786 26/33 (79%)
Ank_2 704..800 CDD:289560 76/95 (80%)
ANK 734..872 CDD:238125 105/149 (70%)
ANK repeat 735..767 CDD:293786 26/31 (84%)
ANK repeat 769..800 CDD:293786 23/30 (77%)
Ank_2 774..862 CDD:289560 65/99 (66%)
ANK repeat 802..862 CDD:293786 44/71 (62%)
zf-C3HC4_3 968..1011 CDD:290631 28/42 (67%)
zf-C3HC4_3 1013..1058 CDD:290631 29/44 (66%)
zf-C3HC4_3 1179..1222 CDD:290631 32/42 (76%)
Mib1NP_001351926.1 MIB_HERC2 15..71 CDD:369043 50/55 (91%)
ZZ_Mind_bomb 83..127 CDD:239079 39/43 (91%)
MIB_HERC2 154..218 CDD:369043 55/63 (87%)
SH3_15 246..311 CDD:375773 52/64 (81%)
SH3_15 333..397 CDD:375773 46/63 (73%)
ANK 1 430..460 17/43 (40%)
PHA03095 439..>710 CDD:222980 207/284 (73%)
ANK 2 463..492 18/28 (64%)
ANK repeat 464..494 CDD:293786 18/29 (62%)
ANK repeat 496..560 CDD:293786 53/63 (84%)
ANK 3 496..525 22/28 (79%)
ANK 4 529..558 24/28 (86%)
ANK repeat 562..593 CDD:293786 20/30 (67%)
ANK 5 562..591 19/28 (68%)
ANK 6 595..627 25/31 (81%)
ANK repeat 631..663 CDD:293786 26/31 (84%)
ANK 7 631..661 25/29 (86%)
ANK repeat 665..696 CDD:293786 23/30 (77%)
ANK 8 665..694 22/28 (79%)
Ank_2 670..770 CDD:372319 65/99 (66%)
ANK 9 698..729 24/30 (80%)
RING1-HC_MIB1 818..854 CDD:319638 25/35 (71%)
RING-HC finger (C3HC4-type) 819..853 CDD:319638 23/33 (70%)
RING2-HC_MIB1 865..901 CDD:319639 25/35 (71%)
RING-HC finger (C3HC4-type) 866..900 CDD:319639 24/33 (73%)
RING3-HC_MIB1 962..1003 CDD:319641 29/40 (73%)
RING-HC finger (C3HC4-type) 963..995 CDD:319641 23/31 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833082
Domainoid 1 1.000 126 1.000 Domainoid score I5412
eggNOG 1 0.900 - - E1_KOG4582
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10810
Inparanoid 1 1.050 1318 1.000 Inparanoid score I152
Isobase 1 0.950 - 0 Normalized mean entropy S3154
OMA 1 1.010 - - QHG46014
OrthoDB 1 1.010 - - D119594at33208
OrthoFinder 1 1.000 - - FOG0002693
OrthoInspector 1 1.000 - - oto93079
orthoMCL 1 0.900 - - OOG6_104088
Panther 1 1.100 - - LDO PTHR24202
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4659
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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