DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mib1 and mib2

DIOPT Version :10

Sequence 1:NP_648826.2 Gene:mib1 / 39750 FlyBaseID:FBgn0263601 Length:1226 Species:Drosophila melanogaster
Sequence 2:NP_001116916.1 Gene:mib2 / 100144683 XenbaseID:XB-GENE-1217510 Length:951 Species:Xenopus tropicalis


Alignment Length:1162 Identity:400/1162 - (34%)
Similarity:568/1162 - (48%) Gaps:245/1162 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 NSAAALVRRFSMEGVGARVIRGPDWKWNKQDGGEGHVGTVRNF-------ESAEEVVVVWDNGTA 151
            ||||       |: ||.||:||.||||:.||.|||.:|||...       ...:.|||.||:||.
 Frog     5 NSAA-------MQ-VGMRVVRGIDWKWSNQDNGEGSMGTVVEIGRQGSPTTPDKTVVVQWDHGTR 61

  Fly   152 ANYRCA--GAYDLRILDSAPTGVKHEGTMCDTCRQQPIFGIRWKCAECINYDLCSICYHGDKHHL 214
            .|||..  |||||.:.|:|.|||:|...:||.|::..|.|:||||..|.:||||:.||..:||.|
 Frog    62 TNYRTGFQGAYDLLLYDNAQTGVRHPNIICDCCKKHGIRGMRWKCKVCFDYDLCTQCYMNNKHDL 126

  Fly   215 RHRFYRITTPGGERTMLEPRRKSKKVLARGIFPGARVVRGVDWQWEDQDGGVGRRGKVNEIQDWS 279
            .|.|.|..|......:|..|:...:|:.:|||.||:||||.||:|.:||||.|:.|:|.:|:.|.
 Frog   127 SHIFERYETADSRPVILSTRQGLPRVVLKGIFQGAKVVRGPDWEWGNQDGGEGKVGRVVDIRGWD 191

  Fly   280 SASPRSAAYVIWDNGSKNLYRVGFEGMADLKVVNDAKGSNVYRDHLPLLG-----ENGPGKGPHG 339
            ..:.||.|.|.|.:|:.|:||||.:|..|||.:.||.|.:.||||||.||     :.......|.
 Frog   192 VETGRSVASVTWADGTTNVYRVGHKGKVDLKCITDAPGGHYYRDHLPKLGKPAELQRKESSERHP 256

  Fly   340 FQIGDKVTVDLDLEIVQSLQHGHGGWTDGMFECLSNAGMVVGIDEDHDIVVAYNSGNRWTFNPAV 404
            ||.||||...||:||::.:|.|||||...|.|.:...|.|..|.|..|:.|.|||..||||:|..
 Frog   257 FQHGDKVKCLLDVEILREMQEGHGGWNPKMAEFIGQTGTVHRITERGDVRVQYNSETRWTFHPGA 321

  Fly   405 LTKVSSPTTAPPEFQVGDIVKICSDVESIKILQRGHGEWADAMQLTLGKIGRVQQVYHDNDLKVE 469
            |||.:|       |.|||:|::..:::::|.||.|||||.|.|...||:||:|.:|:.|.|::|.
 Frog   322 LTKQNS-------FWVGDVVRVMDNMDAVKKLQVGHGEWTDDMVSALGQIGKVIKVFGDGDMRVS 379

  Fly   470 VGNTSWTYNPLAVCKVASSTASDGSCAPVIPSSE---RLSAILKKLFEPNVSGDATEEFVKAAAN 531
            ||..|||:||  .|..:.....|.:......:.|   .|.:||:||.......::....|..||.
 Frog   380 VGGQSWTFNP--ACLTSYQREEDANLMTTENAKESKNTLVSILEKLLSQKTDCESPTSLVIEAAQ 442

  Fly   532 GFAARCEEYLAGAAQPSTSSASPSSGPD-VNVNGVFAGHTALQAASQNGHIEVIQVLLRHAVDVE 595
            |..|:..|.|             ...|| |::..  .|.||||.||..|::||::|||:...:::
 Frog   443 GNTAKVREML-------------QKYPDKVDIKN--QGRTALQVASHLGYMEVVKVLLQANANID 492

  Fly   596 IEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHP 660
            :.|.:||.|:|:||:|::|.|:.:|...||:....|..:.|:|:||||||...||:.|....|..
 Frog   493 LRDDEGDTALHYAAYGNQAGVVRVLLSKGANAELLNNAKCTALYIAVNKGFTEVVQVLCNPNCAI 557

  Fly   661 SLQDSEGDTPLHDAISKEHDEMLSLLLDF-GADITLNNNNGFNALHHAALKGNPSAMKILLTKTN 724
            ::|||.||||||.||:.:...::.:|.:. ..|.|:.||.|||.|||:|||||..|:..:|.:..
 Frog   558 NMQDSFGDTPLHYAITADFRSIIEILTEVPNIDFTVQNNQGFNLLHHSALKGNVLAVSKILERAR 622

  Fly   725 RPWIVEEKKDDGYTALHLAALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLL 789
            :  :|:.||:||:||||||.||||.|:.|:|:..|:.:::.:|...||.|||||.:.|:.:|.||
 Frog   623 Q--LVDSKKEDGFTALHLATLNNHQEVVEILIKEGRCDVNLRNNRNQTPLHLAVAQGHISLVHLL 685

  Fly   790 VQDGADLNIPDKDGDTPLHEALRHHTLSQLKQLQDVEGFGKLLM------GLRNANNKKASASIA 848
            |.:|||:|..|:|||||:|.......|..:...|  ||.|..|:      ||.........:::|
 Frog   686 VTEGADVNAEDEDGDTPMHIVFVRQHLKSIDSQQ--EGNGSSLLTKLEASGLPGNIELNVGSAMA 748

  Fly   849 CFLAANGADLTLKNRKQQTPLDLCPDPNLCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASG 913
            ||||.:|||:...|.:.::||||..|..:.. |||.:.::..:..||                  
 Frog   749 CFLALSGADINYANHRGKSPLDLIADGRITH-LVKNFAQKFREQVEL------------------ 794

  Fly   914 SLNQSSSVNMPLSSLAASSTFPAASSSSIFALNGIANEMSQSLHEDPPKSSASLDECLVCSDAKR 978
                                                         |.|..|        ||..:.
 Frog   795 ---------------------------------------------DSPTVS--------CSLRRV 806

  Fly   979 DTVFKPCGHVSCCETCAPRVKKCLICRETVSSREKIDECLVCSDRRAAVFFRPCGHMVACEHCSA 1043
            .|......::|.|...:|.                  ||||||:....|.|.||.|.:.||.||.
 Frog   807 HTTPNTMTNLSPCSAASPA------------------ECLVCSELAVLVSFFPCQHSIVCEECSR 853

  Fly  1044 LMKKCVLCRTQIDEILSFSLCCGGSGRPEKVSVAAGAMATVGLPLPDDRFMEAAAAAACANASGH 1108
            .||||:.|:          :|.....|.:...|..                              
 Frog   854 RMKKCIKCQ----------VCIARKLRQDSTEVEC------------------------------ 878

  Fly  1109 SVAMNNTVVTPVAGSSNQLNSQNNLLAAAAASSNVSNLSAAGNAMVAPSNVNNFQMDDVQKLKQQ 1173
                                                          :||    .::.|.:|:.::
 Frog   879 ----------------------------------------------SPS----LEVSDQKKVMEE 893

  Fly  1174 LQD----IKEQTMCPVCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVEKRILLF 1226
            ||:    ::|:..||:|.|....:||.||||:|..|...:..|||||:.:.:||.:|
 Frog   894 LQNRYRQMEERITCPICIDNHIKLVFQCGHGSCTECSTSLTACPICRQLIRERIQIF 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib1NP_648826.2 MIB_HERC2 109..166 CDD:461991 32/65 (49%)
ZZ_Mind_bomb 177..221 CDD:239079 21/43 (49%)
MIB_HERC2 248..313 CDD:461991 33/64 (52%)
SH3_15 340..405 CDD:465720 32/64 (50%)
SH3_15 418..482 CDD:465720 31/63 (49%)
ANKYR 559..824 CDD:440430 114/266 (43%)
ANK repeat 568..598 CDD:293786 13/29 (45%)
ANK repeat 600..631 CDD:293786 12/30 (40%)
ANK repeat 633..664 CDD:293786 12/30 (40%)
ANK repeat 666..695 CDD:293786 10/29 (34%)
ANK repeat 699..733 CDD:293786 14/33 (42%)
ANK repeat 735..767 CDD:293786 16/31 (52%)
ANK repeat 769..800 CDD:293786 16/30 (53%)
ANK repeat 802..862 CDD:293786 22/65 (34%)
RING-HC_MIB1_rpt1 968..1005 CDD:438384 6/36 (17%)
RING-HC_MIB1_rpt2 1015..1052 CDD:438385 19/36 (53%)
RING-HC_MIB1_rpt3 1181..1226 CDD:438387 19/44 (43%)
mib2NP_001116916.1 MIB_HERC2 12..78 CDD:461991 32/65 (49%)
ZZ_Mind_bomb 89..133 CDD:239079 21/43 (49%)
MIB_HERC2 160..224 CDD:461991 33/63 (52%)
SH3_15 257..322 CDD:465720 32/64 (50%)
SH3_15 328..392 CDD:465720 31/65 (48%)
ANKYR 413..720 CDD:440430 128/325 (39%)
ANK repeat 434..463 CDD:293786 10/41 (24%)
ANK repeat 465..495 CDD:293786 13/29 (45%)
ANK repeat 497..528 CDD:293786 12/30 (40%)
ANK repeat 530..561 CDD:293786 12/30 (40%)
ANK repeat 598..629 CDD:293786 14/32 (44%)
ANK repeat 631..663 CDD:293786 16/31 (52%)
ANK repeat 665..696 CDD:293786 16/30 (53%)
RING-HC_MIB2_rpt1 825..862 CDD:438386 19/54 (35%)
RING_Ubox 901..951 CDD:473075 21/50 (42%)

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