DRSC/TRiP Functional Genomics Resources

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Protein Alignment hzg and SSP4b

DIOPT Version :10

Sequence 1:NP_001261912.1 Gene:hzg / 39748 FlyBaseID:FBgn0036556 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_193548.7 Gene:SSP4b / 827539 AraportID:AT4G18140 Length:446 Species:Arabidopsis thaliana


Alignment Length:228 Identity:82/228 - (35%)
Similarity:121/228 - (53%) Gaps:27/228 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RRNRTKTN-----QNGTQIDGSTTPPPLPDQQRYLLPQVRLTDM---------------HRKC-- 114
            |.||:::.     :|.|:.:.:....|    |.:|..|..|.|:               .||.  
plant   210 RINRSRSKNLEAAENHTEAEQTEDFDP----QIFLRNQPELADVVFNYFPDMQQPRDSPKRKAVT 270

  Fly   115 MVIDLDETLVHSSFKPIPNADFIVPVEIDGTVHQVYVLKRPHVDEFLQKMGELYECVLFTASLAK 179
            :|:|||||||||:.:...:.||...|..:...:.|||.:||::..||:::.||:..|:||||.:.
plant   271 LVLDLDETLVHSTLEVCRDTDFSFRVTFNMQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSI 335

  Fly   180 YADPVADLLDKWNVF-RARLFRESCVYYRGNYIKDLNRLGRDLQKIVIVDNSPASYIFHPDNAVP 243
            ||..:.|:||....| ..|.:|:||:...|.|.|||..||.||.|:.||||.|..|....:|.:|
plant   336 YASQLLDILDPDGKFVSQRFYRDSCILSDGIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIP 400

  Fly   244 VKSWFDDVTDCELRELIPLFEKLSKVDSVYSVL 276
            :|||:||.||..|..|:|..|.|:..:.|..|:
plant   401 IKSWYDDPTDDGLITLLPFLETLADANDVRPVI 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hzgNP_001261912.1 HIF-SF_euk 112..270 CDD:274055 69/160 (43%)
SSP4bNP_193548.7 HIF-SF_euk 269..423 CDD:274055 66/153 (43%)

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