DRSC/TRiP Functional Genomics Resources

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Protein Alignment hzg and ctdnep1a

DIOPT Version :9

Sequence 1:NP_001261912.1 Gene:hzg / 39748 FlyBaseID:FBgn0036556 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001007310.1 Gene:ctdnep1a / 492343 ZFINID:ZDB-GENE-041114-177 Length:245 Species:Danio rerio


Alignment Length:209 Identity:88/209 - (42%)
Similarity:119/209 - (56%) Gaps:24/209 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 RY-LLP-----QVRLTDMHRKCMVIDLDETLVHS--------SFKPIPNADFIVPVEIDGTVHQV 149
            || :||     :.||..:.||.:|:||||||:||        :.:|....|||:.|.||....:.
Zfish    43 RYDILPLSPISRNRLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRF 107

  Fly   150 YVLKRPHVDEFLQKMGELYECVLFTASLAKYADPVADLLD-KWNVFRARLFRESCVYYRGNYIKD 213
            :|.||||||.||:.:.:.||.|:||||:..|...|||.|| ...:.:.|.:|:.|....|:||||
Zfish   108 FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGSYIKD 172

  Fly   214 LNRLGRDLQKIVIVDNSPASYIFHPDNAVPVKSWFDDVTDCELRELIPLFEKLSKVDSVYSVLCN 278
            |:.:..||..|||:||||.:|..|||||:|:||||.|.:|..|..|:|:.:.|.....|.|||  
Zfish   173 LSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTSDVRSVL-- 235

  Fly   279 SNQPLNNQTNQQQH 292
                   ..|..||
Zfish   236 -------SRNLHQH 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hzgNP_001261912.1 HIF-SF_euk 112..270 CDD:274055 75/166 (45%)
ctdnep1aNP_001007310.1 HIF-SF_euk 62..230 CDD:274055 75/167 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176152at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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