DRSC/TRiP Functional Genomics Resources

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Protein Alignment hzg and scpl-3

DIOPT Version :10

Sequence 1:NP_001261912.1 Gene:hzg / 39748 FlyBaseID:FBgn0036556 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001379798.1 Gene:scpl-3 / 172032 WormBaseID:WBGene00021629 Length:287 Species:Caenorhabditis elegans


Alignment Length:242 Identity:90/242 - (37%)
Similarity:128/242 - (52%) Gaps:20/242 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PPLPDQQRYLLP--QVRLTDMHRKCMVIDLDETLVHSSFKPIPNADFIVPVEIDGTVHQVYVLKR 154
            |||.::.....|  .|:........:|:||||||||.|..|:.||..:.||......:||||..|
 Worm    42 PPLTEEIMSRCPALPVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVVFQNITYQVYVRLR 106

  Fly   155 PHVDEFLQKMGELYECVLFTASLAKYADPVADLLD-KWNVFRARLFRESCVYYRGNYIKDLNRLG 218
            ||:..||.:|.:.:|.::||||...||:.:.|:|| :.|..|.|||||.||...|||:|||..||
 Worm   107 PHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFREHCVCVFGNYVKDLTILG 171

  Fly   219 RDLQKIVIVDNSPASYIFHPDNAVPVKSWFDDVTDCELRELIPLFEKLSKVD-SVYSVL-----C 277
            ||..|.:|:||:..|:.:..||.:|::|||.|..|.||.:|....|.:..:. .|..:|     .
 Worm   172 RDPSKTMILDNAVQSFAYQLDNGIPIESWFHDRNDTELLKLCSFLEAIPTLGRDVREILRHKYRL 236

  Fly   278 NSNQPLNNQTNQQQHPQE---LQQAP--------NQLHQQLQQQQQQ 313
            ..:.|..:..:||:.|..   |:.||        .||..|:.|:..|
 Worm   237 RDHIPFYSIIHQQEGPGRLPLLEVAPPPVTEPNDEQLITQVVQKHPQ 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hzgNP_001261912.1 HIF-SF_euk 112..270 CDD:274055 71/158 (45%)
scpl-3NP_001379798.1 HIF-SF_euk 66..220 CDD:274055 71/153 (46%)

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