DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hip14 and TIP1

DIOPT Version :10

Sequence 1:NP_001261910.1 Gene:Hip14 / 39747 FlyBaseID:FBgn0259824 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_197535.2 Gene:TIP1 / 832157 AraportID:AT5G20350 Length:620 Species:Arabidopsis thaliana


Alignment Length:589 Identity:172/589 - (29%)
Similarity:256/589 - (43%) Gaps:104/589 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DIVKATQYGAIARVRELVE-SGWDVNQPDSETVTLLHWAAINNRRDIIRYFLEKGATVDAVGGEL 111
            |:..|..||.:.::..||| .|..|::||:.....|.|:|:|||..:.:|.:|.|..|:|. ...
plant    34 DVYTAAAYGDLEKLHRLVECEGSSVSEPDALGYYALQWSALNNRVAVAQYLIEHGGDVNAT-DHT 97

  Fly   112 NATPLHWATRQGHLGAVVLLMAAGADPRIRDAEGCSCIHIAAQFAHTALVAYFIAK-GVDPDLQD 175
            ..|.|||:..:|.:....||:..||.....|..|....|:|||:..||.:.:.::| ..|||:.|
plant    98 GQTALHWSAVRGAIQVAELLLQEGARVDATDMYGYQATHVAAQYGQTAFLCHVVSKWNADPDVPD 162

  Fly   176 RGGMTALMWAAWKVCALDPVRLLLTLGANPAMVDYTHGNTALHWAILARNATAISTLV-LKSKAS 239
            ..|.:.|.|||:|..| |.:||||.|.|.....| ..|.|.||||.:..|..|.:.|| ...|..
plant   163 NDGRSPLHWAAYKGFA-DSIRLLLFLDAYRGRQD-KEGCTPLHWAAIRGNLEACTVLVQAGKKED 225

  Fly   240 LDVPNLRGETPLSMLESQTGAIWIGAKVMDRVKEAALTSQQRRSLLSKLRHDKRLRWWSMVACPF 304
            |.:.:..|.||..:...:..            ::.:......||||.| |.|.        :.|.
plant   226 LMITDKTGLTPAQLAAEKNH------------RQVSFFLGNARSLLEK-RCDG--------SSPL 269

  Fly   305 TAFYLAGIVFTVNTLYIIKFFLLGCLYSIFHTIGKALFDEHLMALLPLSVYLATKAWFYVTWLMY 369
            ......|:   ...|:|                         |.||.|.||  |.:....:.|..
plant   270 GRLSKLGL---APVLWI-------------------------MILLLLLVY--TNSVVLASNLPK 304

  Fly   370 IDDAVSFTATVCFLISSLLLWVCFLKSWKGDPGIIR-------PTREQRFKTIIELSERGGIGFE 427
            :...:...|.:.|::::..|:: |.:..:.|||.||       ..::......|||:....:...
plant   305 LTTGIGALAWLGFILATAGLFL-FYRCSRKDPGYIRMNIHDPQTMKDDEPLLKIELNNPALLAGN 368

  Fly   428 PASFCSGCLVRRPIRSKHCSVCDRCVARFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMCAWMLYG 492
            ....|:.|.:.||:|:||||.|||||.:||||||||.||:|.||...|  ||::||.:.|.::.|
plant   369 WTQLCATCKIIRPLRAKHCSTCDRCVEQFDHHCPWVSNCVGKKNKWEF--FLFLLLEVLAMLITG 431

  Fly   493 GSKYYVNQCNVRFDDFLGAMRAIGNCDAWVGWVMGNALLHMSW----------VILLTICQTYQV 547
            |         |.....|....|..:..||:..|..|.:..:|:          |.:||:.|..| 
plant   432 G---------VTLARVLSDPSAPSSFGAWMSHVASNHVGALSFLLVEFCLFFSVAVLTVIQASQ- 486

  Fly   548 ICLGMTTNERMNRGRYRHFQAKGG--HSPFTRGPIQNLVDFLECSCFGLVQPKRVDWMNYYDYDA 610
            |...:||||..|..||.:.:..||  .:|:..|..:|..|||               :..|:.|.
plant   487 ISRNITTNEMANALRYSYLRGPGGRFRNPYDLGCRRNCSDFL---------------VKGYNEDI 536

  Fly   611 QTHQ 614
            :.|:
plant   537 ECHE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hip14NP_001261910.1 ANKYR <52..246 CDD:440430 70/196 (36%)
ANK repeat 77..108 CDD:293786 11/30 (37%)
ANK repeat 110..142 CDD:293786 9/31 (29%)
ANK repeat 144..175 CDD:293786 11/31 (35%)
ANK repeat 177..209 CDD:293786 14/31 (45%)
ANK repeat 212..244 CDD:293786 12/32 (38%)
DHHC 426..559 CDD:396215 53/142 (37%)
TIP1NP_197535.2 ANKYR 33..264 CDD:440430 80/245 (33%)
ANK repeat 64..95 CDD:293786 11/31 (35%)
ANK repeat 97..128 CDD:293786 9/30 (30%)
ANK repeat 197..226 CDD:293786 11/28 (39%)
DHHC 256..506 CDD:418707 87/301 (29%)

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