DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hip14 and CG4956

DIOPT Version :9

Sequence 1:NP_001261910.1 Gene:Hip14 / 39747 FlyBaseID:FBgn0259824 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_651428.2 Gene:CG4956 / 43114 FlyBaseID:FBgn0039370 Length:302 Species:Drosophila melanogaster


Alignment Length:221 Identity:51/221 - (23%)
Similarity:81/221 - (36%) Gaps:74/221 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 PFTAFY---LAGIVFTVNTLYIIKFFLLGCLYSIFHTIGKALFDEHLMALLPLSVYLATKAWFYV 364
            ||.|.:   |.|::|.....|::                ..:.|.|             ..|..:
  Fly    43 PFCAIFLLCLIGLLFVYELCYVL----------------PQITDPH-------------GIWHKL 78

  Fly   365 TWLMYIDDAVSFTATVCFLISSLLLWVCFLKSWKG---DPGIIRPTREQRFKTIIELSERGGIGF 426
            .|.|.|     :|     :|:.|..|      |.|   :..:.....|:::              
  Fly    79 CWFMGI-----YT-----VINILGNW------WLGCMTNTSVDSLVLERQY-------------- 113

  Fly   427 EPAS-------FCSGCLVRRPIRSKHCSVCDRCVARFDHHCPWVGNCIGLKNHSYFMGFLWMLLI 484
             |.:       :||.|....|.||.|||:|:.|:.:.||||.:..:|||.||..||:.||:.|..
  Fly   114 -PVAGEAHLWHYCSTCQKLVPPRSWHCSLCNICILKRDHHCTFFASCIGHKNQRYFLAFLFHLSF 177

  Fly   485 MCAW-MLYGGSKYYVNQCNVRFDDFL 509
            .... ::|.|...:.|:..:..|..|
  Fly   178 GSGQALVYNGILNWTNKAFLVVDPLL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hip14NP_001261910.1 ANK 52..165 CDD:238125
Ank_2 52..142 CDD:289560
ANK repeat 77..108 CDD:293786
ANK repeat 110..142 CDD:293786
ANK 114..233 CDD:238125
Ank_2 116..209 CDD:289560
ANK repeat 144..175 CDD:293786
ANK repeat 177..209 CDD:293786
Ank_5 198..251 CDD:290568
ANK repeat 212..244 CDD:293786
zf-DHHC 426..559 CDD:279823 31/92 (34%)
CG4956NP_651428.2 zf-DHHC 123..251 CDD:279823 30/81 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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