DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hip14 and Patsas

DIOPT Version :9

Sequence 1:NP_001261910.1 Gene:Hip14 / 39747 FlyBaseID:FBgn0259824 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster


Alignment Length:570 Identity:160/570 - (28%)
Similarity:259/570 - (45%) Gaps:118/570 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FDIVKATQYGAIARVRELVES-GWD-VNQPDSETVTLLHWAAINNRRDIIRYFLEKGATVD-AVG 108
            |||:|   .|.::.|..||:. |.: ::..|....|..||.|:|....::||.:|:.|.:| ...
  Fly   119 FDIIK---NGEVSEVENLVDKFGMECLSARDRHGYTPAHWIALNGNVQLMRYLIERTAPIDLPCL 180

  Fly   109 GELNATPLHWATRQGHLGAVVLLMAAGADPRIRDAEGCSCIHIAAQFAHTALVAYFIAKGVDPDL 173
            |.....|:|||.|:||...|.:|:.||......|.:|.:.:|:|..:..||..||.:..|...:|
  Fly   181 GTQGPRPIHWACRKGHASVVQVLLQAGVAVNAADFKGLTPLHLACMYGRTATAAYLLGMGALNNL 245

  Fly   174 QDRGGMTALMWAAWKVCALDPVRLLLTLGANPAMVDYTHGNTALHWAILARNATAISTLVLKSKA 238
            .|..|.|||.|||:|..| |.:|||:..|......| ..|:|.||.|.|:.|.|.:..|..||:.
  Fly   246 TDINGDTALHWAAYKGHA-DLMRLLMYSGVELQKTD-NFGSTPLHLACLSGNMTCVRLLCEKSQL 308

  Fly   239 SLDVPNLRGETPLSMLESQTGAIWIGAKVMDRVKEAALTSQQRRSLLSKLRHDKRLRWWSMVACP 303
            .|:..:..|:||:.:.::.        :..|.|          |.|..:::  |:.||...|:..
  Fly   309 DLEPRDKNGKTPIMLAQAH--------QHQDVV----------RLLYGEVK--KKSRWIPSVSES 353

  Fly   304 FTAFYLAGIVFTVNTLYIIKFFLLGCLYSIFHTIGKALFDEHLMALLPLSVYLATKAWFYVTWLM 368
            : .:...|...:...|::..|.:|                                .|.|.   |
  Fly   354 W-GWLFGGAGDSKGPLFLFLFSVL--------------------------------LWGYP---M 382

  Fly   369 YIDDAVSFTATV------CFLISSLLLWVCFLKSWKGDPGIIRPTREQRFKTIIE------LSER 421
            |:..|:..|..:      ||:..:.::|:.:..:.:.|||.|..:.:..::.|.:      |.:|
  Fly   383 YMIRAIPITWNILRRSHYCFIYWNAVMWISWAIANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKR 447

  Fly   422 GGIGFEPASFCSGCLVRRPIRSKHCSVCDRCVARFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMC 486
            ..:   ....|..|...||:|:|||.||:|||:.||||||::.||:||:|..:|..|:..:.:.|
  Fly   448 NVM---LTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNC 509

  Fly   487 AWMLY---------GGSKYYVNQCNVRFDDFLGAMRAIGNCDAWVGWVMG-NALLHMSWVILLTI 541
            ::.:|         |.:..||          ||.:.|:..|.  :||::. .::||         
  Fly   510 SFTIYFACYCVMIEGFTMLYV----------LGLIEAVVFCG--LGWILTCTSILH--------- 553

  Fly   542 CQTYQVICLGMTTNERMNRGRYRHFQAKGG--HSPFTRGPIQNLVDFLEC 589
                  .|:.:||||..|..||.:.:.|.|  .:||:||||.||::|..|
  Fly   554 ------ACMNLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPILNLLEFFVC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hip14NP_001261910.1 ANK 52..165 CDD:238125 36/115 (31%)
Ank_2 52..142 CDD:289560 28/92 (30%)
ANK repeat 77..108 CDD:293786 10/31 (32%)
ANK repeat 110..142 CDD:293786 11/31 (35%)
ANK 114..233 CDD:238125 45/118 (38%)
Ank_2 116..209 CDD:289560 35/92 (38%)
ANK repeat 144..175 CDD:293786 9/30 (30%)
ANK repeat 177..209 CDD:293786 14/31 (45%)
Ank_5 198..251 CDD:290568 17/52 (33%)
ANK repeat 212..244 CDD:293786 12/31 (39%)
zf-DHHC 426..559 CDD:279823 44/142 (31%)
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738 67/191 (35%)
ANK repeat 148..181 CDD:293786 10/32 (31%)
ANK repeat 187..214 CDD:293786 11/26 (42%)
ANK repeat 216..247 CDD:293786 9/30 (30%)
ANK repeat 249..280 CDD:293786 14/31 (45%)
ANK repeat 282..314 CDD:293786 12/31 (39%)
Ank_4 283..336 CDD:316185 18/70 (26%)
DHHC 455..567 CDD:334580 45/138 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I2290
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2373
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D213306at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101007
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R35
SonicParanoid 1 1.000 - - X628
87.700

Return to query results.
Submit another query.