Sequence 1: | NP_524099.2 | Gene: | DNApol-delta / 39746 | FlyBaseID: | FBgn0263600 | Length: | 1092 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445931.1 | Gene: | Pola1 / 85241 | RGDID: | 621816 | Length: | 1468 | Species: | Rattus norvegicus |
Alignment Length: | 1244 | Identity: | 293/1244 - (23%) |
---|---|---|---|
Similarity: | 480/1244 - (38%) | Gaps: | 317/1244 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 GHAKKPRNPDDDEEMG-FEAELAAFE---NSEDMDQTLLMGDGPENQTTSERWSRPPPP------ 67
Fly 68 ELDPSKHNLEF-------------QQLDVENYLGQP-------LPGMPGAQIGPV---------- 102
Fly 103 ------PVVRMFG-VTMEGNSV---CCHVHGFCPYFYIEAPSQFEEHHCEKLQKALDQKVIADIR 157
Fly 158 NNKDNVQEAVLMVELVE--------KLNIHGYNG--------------DKKQRYIKISVTLPRFV 200
Fly 201 AAASRL---LKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKP 262
Fly 263 LPESRCQIEV------------DV--------------------------AFDRFISHE-PEGEW 288
Fly 289 SKVAPFR----ILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIG 349
Fly 350 SQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGRIKNIRSV 414
Fly 415 IKEQMLQSKQ-MGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSII 478
Fly 479 TDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMA----RVTGVPLESLLTRGQQIKV 539
Fly 540 LSQLLRKAKTKGFIMPS-------YTSQGSDEQ-----------------YEGATVIEPKRGYYA 580
Fly 581 DPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLL 645
Fly 646 PEILESLLAARKRAKNDLK-VETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSV 709
Fly 710 TAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREAAELVSSK 774
Fly 775 FVHPIKLEFEKVYYPYLLINKKRYAGLYF--TRPDTY-DKMDCKGIETVRRDNSPLVANLMNSCL 836
Fly 837 QKLLIERDPDGAVAYVKQVIADL----LCNRIDISHLVITKELAK--TDYAAKQA--HVELAAKM 893
Fly 894 KKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYV-LENSVPIDATYYLEQQLSKPLLRIFE 957
Fly 958 PILGDNAESIL----LKGEHTRTRTVVTSK-------VGGLAGFMTKKTSCLGCKSLMPKGYEQA 1011
Fly 1012 CLCPHC--EPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDC---PIFYMRQ 1071
Fly 1072 ---KVRMDL 1077 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-delta | NP_524099.2 | PTZ00166 | 48..1092 | CDD:240301 | 282/1205 (23%) |
DNA_polB_delta_exo | 288..517 | CDD:99820 | 51/233 (22%) | ||
POLBc_delta | 564..960 | CDD:99916 | 133/425 (31%) | ||
zf-C4pol | 997..1070 | CDD:290959 | 16/77 (21%) | ||
Pola1 | NP_445931.1 | DNA_pol_alpha_N | 41..101 | CDD:289058 | |
pol2 | 56..1232 | CDD:273159 | 259/1103 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 105..135 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 174..226 | ||||
DNA_polB_alpha_exo | 542..774 | CDD:99819 | 55/276 (20%) | ||
DNA-binding. /evidence=ECO:0000255 | 657..722 | 17/72 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 816..836 | 1/19 (5%) | |||
POLBc_alpha | 839..1249 | CDD:99915 | 137/429 (32%) | ||
DNA-binding. /evidence=ECO:0000255 | 1252..1383 | 27/118 (23%) | |||
zf-DNA_Pol | 1272..1461 | CDD:286132 | 23/98 (23%) | ||
CysB motif | 1355..1381 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0417 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |