DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and ARF3

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_014737.1 Gene:ARF3 / 854261 SGDID:S000005620 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:176 Identity:86/176 - (48%)
Similarity:126/176 - (71%) Gaps:2/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSYFRG-LLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            ||..:|...| |.||:||:||:||||.||||||||:|::.::.|:.||:|||||.|||||:||.:
Yeast     1 MGNSISKVLGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNM 65

  Fly    65 WDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDM 129
            ||:|||..:||.||.|:..|.|:|:|:||:.|:|:..:|:||..::.|:|:...:|:|.|||||:
Yeast    66 WDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDL 130

  Fly   130 DGCMTVAEVHHALGLE-NLKNRTFQIFKTSATKGEGLDQAMDWLSN 174
            ...|...||...|.|| ||||:.:.:..::|..|:||.:.:.|:||
Yeast   131 KDAMKPQEVSDFLELEKNLKNQPWCVIGSNALSGQGLVEGLSWISN 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 77/158 (49%)
ARF3NP_014737.1 Arf6 9..177 CDD:206716 83/168 (49%)

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