DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and ARFA1D

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_177206.1 Gene:ARFA1D / 843385 AraportID:AT1G70490 Length:181 Species:Arabidopsis thaliana


Alignment Length:182 Identity:102/182 - (56%)
Similarity:130/182 - (71%) Gaps:5/182 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSY---FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKF 62
            ||  ||:   |..|...:|||||::|||.||||||||:|::||:||||||||||||.|.|||:.|
plant     1 MG--LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF 63

  Fly    63 QVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQ 127
            .|||:|||..|||.||.|:.||..:|:||||.||||:..::|||..||.|:||..|:|:|.||||
plant    64 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQ 128

  Fly   128 DMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
            |:...|..||:...|||.:|:.|.:.|..|.||.||||.:.:|||||.:..:
plant   129 DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 93/156 (60%)
ARFA1DNP_177206.1 PLN00223 1..181 CDD:165788 102/182 (56%)

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