DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and ARFD1A

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_563652.1 Gene:ARFD1A / 839230 AraportID:AT1G02440 Length:190 Species:Arabidopsis thaliana


Alignment Length:185 Identity:62/185 - (33%)
Similarity:106/185 - (57%) Gaps:15/185 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSY-FRGLLGSREMRILILGLDGAGKTTILYRLQVGE-VVTTIPTIGFNVEQVTYKNLKFQ 63
            ||..|.. |.|.....|.||::.||.|.||::|:::.:.|| :.||:||:|.|||.|.||:....
plant     1 MGTTLGKPFAGFFHQEEARIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSNLC 65

  Fly    64 VWDLGGQTSIR--PYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAI-----LV 121
            .|::|||....  |.|:.::.....::.||||..||:|..:||.|..::  :|:.|::     ::
plant    66 FWEMGGQQCYMWFPLWKHWFQEIAGLVLVVDSTGRDQIEETKDFLNVVI--DEIQGSVPDNAPVL 128

  Fly   122 VLANKQDMDGCMTVAEVHHALGLENLKNRTFQ----IFKTSATKGEGLDQAMDWL 172
            |..||.::.|.|:.:|:.:.|.|.:|:.:.:|    :..:.|..|:||.:.:|||
plant   129 VYGNKHEVPGAMSASEISNKLDLTSLRKKNWQRNWHVQSSCAFSGDGLHEGLDWL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 56/167 (34%)
ARFD1ANP_563652.1 Arf_Arl 19..186 CDD:206644 56/167 (34%)

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