DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl1 and Arf2

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_077064.1 Gene:Arf2 / 79119 RGDID:621271 Length:181 Species:Rattus norvegicus


Alignment Length:181 Identity:100/181 - (55%)
Similarity:132/181 - (72%) Gaps:1/181 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            ||.|. ..|:.|.|.:|||||::|||.||||||||:|::||:||||||||||||.|.|||:.|.|
  Rat     1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    65 WDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDM 129
            ||:|||..|||.||.|:.||..:|:||||.||:|:..:::||..||.|:||..|:|:|..||||:
  Rat    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDL 130

  Fly   130 DGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ...|..||:...|||.:|:.|.:.|..|.||.|:||.:.:|||||.|:::|
  Rat   131 PNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 89/156 (57%)
Arf2NP_077064.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 99/178 (56%)

Return to query results.
Submit another query.