DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl16

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001039060.1 Gene:arl16 / 733846 XenbaseID:XB-GENE-5885221 Length:186 Species:Xenopus tropicalis


Alignment Length:144 Identity:43/144 - (29%)
Similarity:80/144 - (55%) Gaps:6/144 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGIS 102
            :|:.:.|.||:|.|:..:|.:.....|.::||  |:.|.|..||.:..::|::||:|:.:::..|
 Frog    45 MGDALPTQPTVGTNLTDLTIQKAHVTVREVGG--SMGPIWPSYYRDCKSVIFMVDAANPNQVSAS 107

  Fly   103 KDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENL---KNRTFQIFKTSATKGEG 164
            ..:||.:|..|.|..|.:::|.||.|:...|::.|:.....::::   ..:...:.:||:..|.|
 Frog   108 CIQLLAVLSAEPLVSASVLILFNKIDLPCYMSLVEIKSLFRMDDIISCAKQQISVLQTSSLDGTG 172

  Fly   165 LDQAMDWL-SNTLQ 177
            |...|.|| ||..|
 Frog   173 LQDVMHWLHSNCAQ 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 41/140 (29%)
arl16NP_001039060.1 P-loop_NTPase 51..180 CDD:304359 37/130 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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